| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1656 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1801744 |
|---|
| End bp | 1803276 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | ACX39320 |
|---|
| Protein GI | 260448898 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00614982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAGA TAGTCGGCGC GCTGATCCTG CTGATCGCAG GATTTGCCAT TCTTCGCCTT
TTGTTCAGAG CATTAATCAG CACGGCTTCT GCGCTGGCAG GGCTCATATT GCTGTGTCTG
TTCGGCCCGG CCTTACTGGC TGGCTATATC ACCGAACGCA TAACCCGGTT GTTCCATATT
CGCTGGCTGG CAGGCGTATT TCTGACGATT GCCGGAATGA TCATCAGCTT CATGTGGGGA
CTTGATGGTA AACATATCGC GCTGGAGGCT CACACCTTTG ACTCTGTGAA ATTTATTCTG
ACCACCGCTC TCGCCGGTGG TCTGCTGGCT GTTCCCCTGC AGATCAAAAA CATTCAGCAG
AACGGGATCA CACCAGAAGA TATCAGCAAG GAAATTAACG GGTATTACTG CTGTTTTTAT
ACTGCCTTTT TCCTTATGGC GTGTTCTGCA TGCGCACCAT TGATCGCGTT ACAGTACGAT
ATTTCACCGT CACTGATGTG GTGGGGCGGG TTGTTGTACT GGCTGGCTGC ATTAGTGACG
CTGCTATGGG CGGCCAGCCA GATCCAGGCG CTGAAAAAAC TGACCTGTGC CATCAGCCAG
ACACTGGAAG AACAACCGGT GCTCAACAGT AAATCGTGGC TGACCAGTTT GCAAAACGAT
TACAGCCTTC CTGACTCACT GACGGAGCGC ATCTGGCTGA CGCTCATTTC TCAACGGATT
TCCCGGGGAG AGCTGAGGGA ATTTGAACTG GCAGACGGAA ACTGGTTACT GAACAATGCC
TGGTATGAAA GAAACATGGC AGGGTTTAAC GAACAGTTGA AAGAGAACCT GTCATTCACA
CCTGATGAAC TGAAAACGCT CTTCCGGAAC CGCCTGAATT TATCACCGGA AGCGAATGAC
GATTTTCTCG ATCGTTGCCT GGACGGCGGT GACTGGTATC CCTTTTCAGA AGGTCGCCGT
TTTGTATCAT TCCATCACGT GGATGAGCTT CGTATCTGTG CCTCCTGCGG GCTGACAGAA
GTACATCATG CCCCGGAAAA TCATAAGCCG GATCCGGAAT GGTACTGCTC CTCTCTTTGT
CGCGAAACAG AAACACTGTG TCAGGAAATT TATGAACGCC CTTACAACAG CTTTATTTCC
GATGCAACGG CGAATGGTCT GATTCTCATG AAACTGCCGG AAACCTGGAG TACAAATGAG
AAAATGTTTG CTTCCGGAGG GCAGGGACAT GGGTTTGCCG CTGAACGGGG AAACCATATT
GTCGACAGAG TCCGTCTGAA AAACGCACGG ATCCTCGGTG ATAATAATGC CAGAAATGGA
GCAGACAGAC TGGTCAGCGG AACAGAAATC CAGACGAAAT ATTGTTCAAC TGCAGCCCGT
AGCGTCGGTG CGGCATTCGA CGGACAAAAC GGACAGTATC GTTACATGGG AAATAATGGC
CCCATGCAAC TGGAAGTCCC CCGTGATCAG TATGCCGGCG CTGTTGAAAC CATGAGGAAT
AAGATCCGCG AAGGTAAAGT AGAGGAGAGA TGA
|
|---|
| Protein sequence | MLQIVGALIL LIAGFAILRL LFRALISTAS ALAGLILLCL FGPALLAGYI TERITRLFHI
RWLAGVFLTI AGMIISFMWG LDGKHIALEA HTFDSVKFIL TTALAGGLLA VPLQIKNIQQ
NGITPEDISK EINGYYCCFY TAFFLMACSA CAPLIALQYD ISPSLMWWGG LLYWLAALVT
LLWAASQIQA LKKLTCAISQ TLEEQPVLNS KSWLTSLQND YSLPDSLTER IWLTLISQRI
SRGELREFEL ADGNWLLNNA WYERNMAGFN EQLKENLSFT PDELKTLFRN RLNLSPEAND
DFLDRCLDGG DWYPFSEGRR FVSFHHVDEL RICASCGLTE VHHAPENHKP DPEWYCSSLC
RETETLCQEI YERPYNSFIS DATANGLILM KLPETWSTNE KMFASGGQGH GFAAERGNHI
VDRVRLKNAR ILGDNNARNG ADRLVSGTEI QTKYCSTAAR SVGAAFDGQN GQYRYMGNNG
PMQLEVPRDQ YAGAVETMRN KIREGKVEER
|
|---|
| |