| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1643 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1790993 |
|---|
| End bp | 1792351 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | ACX39307 |
|---|
| Protein GI | 260448885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.121061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCATA ACGTTACTCC AAACACCTCT CGCGTGGAAT TGCGTAAAAC GCTTACGTTA
GTTCCGGTTG TAATGATGGG TCTTGCCTAT ATGCAGCCGA TGACGCTGTT TGATACTTTT
GGTATCGTTT CAGGCCTCAC GGATGGTCAT GTGCCGACAG CCTATGCGTT CGCATTGATT
GCGATCCTGT TTACGGCTCT GAGCTACGGG AAGCTGGTTC GCCGCTATCC TTCTGCTGGC
TCTGCATACA CTTACGCCCA GAAATCCATT AGCCCGACTG TCGGCTTTAT GGTGGGTTGG
TCTTCTCTGC TCGACTATCT GTTCGCGCCG ATGATCAACA TTCTACTGGC GAAAATCTAT
TTTGAAGCTC TGGTGCCTTC CATCCCATCG TGGATGTTTG TGGTGGCGCT GGTGGCCTTT
ATGACCGCTT TTAACCTGCG TAGTCTGAAA TCCGTAGCGA ACTTCAACAC TGTAATCGTC
GTGTTGCAGG TAGTGCTGAT CGCGGTGATT CTGGGCATGG TTGTTTATGG CGTATTTGAA
GGTGAAGGCG CTGGTACGCT GGCGAGCACT CGTCCATTCT GGTCTGGCGA TGCGCATGTT
ATCCCGATGA TTACCGGGGC GACAATCCTG TGCTTCTCCT TTACCGGCTT TGACGGCATC
AGCAACCTGT CGGAAGAAAC CAAAGATGCA GAGCGCGTGA TCCCGCGTGC GATTTTCCTG
ACCGCGCTGA TCGGCGGCAT GATCTTCATC TTTGCAACTT ACTTCCTGCA GCTGTACTTC
CCGGATATCT CTCGCTTTAA AGATCCGGAT GCGTCACAGC CTGAAATCAT GCTGTACGTT
GCGGGTAAAG CGTTCCAGGT TGGCGCGCTG ATCTTCTCCA CCATTACCGT ACTGGCGTCC
GGTATGGCGG CGCATGCAGG CGTAGCGCGT CTGATGTACG TAATGGGTCG TGACGGCGTA
TTCCCGAAAA GCTTCTTCGG TTATGTACAC CCGAAATGGC GTACTCCGGC GATGAACATC
ATCCTGGTTG GCGCGATTGC CCTGCTGGCA ATCAACTTCG ACCTGGTAAT GGCAACGGCG
CTGATTAACT TTGGTGCGCT GGTGGCGTTC ACTTTCGTTA ACCTGTCGGT CATCTCGCAG
TTCTGGATCC GTGAGAAGCG TAACAAGACG CTGAAAGATC ACTTCCAGTA TCTGTTCCTG
CCGATGTGTG GTGCGCTGAC CGTTGGTGCG CTGTGGGTTA ACCTGGAAGA AAGCTCAATG
GTTCTGGGTC TGATCTGGGC TGCTATCGGT CTGATTTACC TGGCTTGCGT CACCAAGAGC
TTCCGTAATC CGGTTCCGCA GTACGAAGAC GTAGCATAA
|
|---|
| Protein sequence | MSHNVTPNTS RVELRKTLTL VPVVMMGLAY MQPMTLFDTF GIVSGLTDGH VPTAYAFALI
AILFTALSYG KLVRRYPSAG SAYTYAQKSI SPTVGFMVGW SSLLDYLFAP MINILLAKIY
FEALVPSIPS WMFVVALVAF MTAFNLRSLK SVANFNTVIV VLQVVLIAVI LGMVVYGVFE
GEGAGTLAST RPFWSGDAHV IPMITGATIL CFSFTGFDGI SNLSEETKDA ERVIPRAIFL
TALIGGMIFI FATYFLQLYF PDISRFKDPD ASQPEIMLYV AGKAFQVGAL IFSTITVLAS
GMAAHAGVAR LMYVMGRDGV FPKSFFGYVH PKWRTPAMNI ILVGAIALLA INFDLVMATA
LINFGALVAF TFVNLSVISQ FWIREKRNKT LKDHFQYLFL PMCGALTVGA LWVNLEESSM
VLGLIWAAIG LIYLACVTKS FRNPVPQYED VA
|
|---|
| |