Gene EcDH1_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1617 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1766080 
End bp1766937 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content47% 
IMG OID 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionACX39282 
Protein GI260448860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.199276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCC TCCTTTTTGG CAAAACAGGG CAGGTAGGTT GGGAACTACA GCGTGCTCTG 
GCACCTTTGG GTAATTTGAT TGCTTTTGAT GTTCACTCTA CTGATTATTG CGGTGATTTT
AGTAATCCTG AAGGTGTAGC TGAAACCGTA AGAAGCATTC GGCCGGATAT TATTGTCAAT
GCAGCCGCTC ACACCGCAGT AGACAAAGCA GAATCAGAAC CGGAGTTTGC ACAATTAATT
AACGCAACAA GTGTCGAAGC GATTGCGAAA GCAGCAAATG AAGTTGGAGC CTGGGTTATC
CATTACTCGA CTGATTACGT CTTCCCTGGA AATGGCGATA TGCCATGGCT GGAGACGGAT
GCAACCGCAC CACTAAATGT TTACGGTGAA ACCAAGTTAG CCGGAGAAAA AGCGTTACAG
GAATATTGCG CGAAGCATCT TATTTTCCGG ACCAGCTGGG TCTATGCAGG AAAAGGAAAT
AACTTCGCCA AAACGATGTT ACGTCTGGCA AAAGAGCGTG AAGAATTAGC GGTTATTAAC
GATCAGTTTG GTGCGCCAAC AGGTGCTGAA CTGCTGGCTG ATTGTACAGC ACATGCCATT
CGTGTCGCAC TGAATAAACC GGATGTCGCA GGCTTGTACC ATTTGGTAGC CAGTGGTACC
ACAACCTGGT ACGATTATGC TGCGCTGGTT TTTGAAGAGG CGCGCAAAGC AGGCATTCCC
TTGCACTCAA CAAGCTCAAC GCAGTACCAA CAACAGCCTA TCCTACACCA GCTCGTCGTC
CACATAACTC TCGCCTTAAT ACAGAAAAAT TTCAGCAGAA CTTTGCGCTT GTCTTGCCTG
ACTGGCAGGT TGGCGTGA
 
Protein sequence
MNILLFGKTG QVGWELQRAL APLGNLIAFD VHSTDYCGDF SNPEGVAETV RSIRPDIIVN 
AAAHTAVDKA ESEPEFAQLI NATSVEAIAK AANEVGAWVI HYSTDYVFPG NGDMPWLETD
ATAPLNVYGE TKLAGEKALQ EYCAKHLIFR TSWVYAGKGN NFAKTMLRLA KEREELAVIN
DQFGAPTGAE LLADCTAHAI RVALNKPDVA GLYHLVASGT TTWYDYAALV FEEARKAGIP
LHSTSSTQYQ QQPILHQLVV HITLALIQKN FSRTLRLSCL TGRLA