| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1600 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1745986 |
|---|
| End bp | 1747203 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | colanic acid biosynthesis glycosyl transferase WcaC |
|---|
| Protein accession | ACX39265 |
|---|
| Protein GI | 260448843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT TGCAATTTAA TGTGCGACTG GCGGAAGGCG GGGCAGCAGG TGTGGCGTTA
GATCTCCACC AGCGTGCGCT GCAACAGGGG CTGGCGTCAC ATTTTGTCTA CGGTTACGGC
AAAGGCGGCA AAGAGAGCGT CAGCCATCAG AACTATCCGC AGGTCATCAA ACATACGCCG
CGGATGACCG CGATGGCGAA TATTGCTCTG TTTCGTCTGT TTAATCGCGA TCTGTTTGGC
AATTTCAATG AGTTATATCG CACCATTACT CGCACAGCGG GTCCGGTGGT CCTGCATTTT
CATGTGCTGC ACAGCTACTG GCTAAATCTT AAGAGCGTGG TGCGCTTTTG CGAAAAAGTG
AAAAACCATA AACCGGACGT CACTCTGGTC TGGACGCTGC ACGACCACTG GAGTGTTACC
GGACGCTGCG CCTTTACCGA CGGTTGCGAA GGCTGGAAAA CAGGCTGCCA GAAATGCCCG
ACCTTAAATA ACTATCCGCC GGTGAAGATT GATCGCGCAC ACCAACTGGT GGCGGGCAAA
CGCCAGTTAT TCCGTGAGAT GCTGGCGCTG GGCTGTCAGT TTATTTCCCC CAGCCAGCAT
GTGGCTGACG CTTTCAATAG CCTGTACGGT CCAGGGCGTT GCCGGATTAT CAATAATGGC
ATTGATATGG CAACTGAAGC GATTCTGGCG GACTTGCCTC CGGTGCGCGA AACCCAGGGC
AAGCCGAAAA TCGCGGTGGT GGCGCATGAT CTGCGTTACG ACGGCAAAAC TAACCAGCAA
CTGGTACGCG AGATGATGGC GCTGGGCGAC AAAATTGAAC TGCATACCTT TGGTAAGTTC
TCGCCGTTCA CCGCTGGCAA CGTGGTTAAT CACGGCTTTG AAACCGACAA ACGTAAGCTG
ATGAGCGCGC TCAATCAGAT GGATGCGCTG GTATTCAGTT CTCGCGTCGA TAACTACCCG
CTGATTTTGT GTGAGGCGCT ATCGATTGGC GTGCCGGTGA TTGCCACCCA TAGCGATGCG
GCGCGGGAAG TGTTGCAAAA ATCCGGCGGT AAAACCGTCA GCGAAGAAGA GGTGCTGCAA
CTGGTGCAGT TAAGCAAACC GGAAATCGCG CAGGCGATAT TTGGTACCAC GCTGGCTGAG
TTCAGCCAAC GCAGCCGCGC CGCCTACAGT GGACAACAGA TGCTGGAGGA GTATGTCAAC
TTCTATCAGA ATCTGTAG
|
|---|
| Protein sequence | MNILQFNVRL AEGGAAGVAL DLHQRALQQG LASHFVYGYG KGGKESVSHQ NYPQVIKHTP
RMTAMANIAL FRLFNRDLFG NFNELYRTIT RTAGPVVLHF HVLHSYWLNL KSVVRFCEKV
KNHKPDVTLV WTLHDHWSVT GRCAFTDGCE GWKTGCQKCP TLNNYPPVKI DRAHQLVAGK
RQLFREMLAL GCQFISPSQH VADAFNSLYG PGRCRIINNG IDMATEAILA DLPPVRETQG
KPKIAVVAHD LRYDGKTNQQ LVREMMALGD KIELHTFGKF SPFTAGNVVN HGFETDKRKL
MSALNQMDAL VFSSRVDNYP LILCEALSIG VPVIATHSDA AREVLQKSGG KTVSEEEVLQ
LVQLSKPEIA QAIFGTTLAE FSQRSRAAYS GQQMLEEYVN FYQNL
|
|---|
| |