Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1597 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1742404 |
End bp | 1744566 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | capsular exopolysaccharide family |
Protein accession | ACX39262 |
Protein GI | 260448840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.818894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAA AAGTAAAACA ACATGCCGCT CCGGTAACGG GCAGTGATGA AATCGATATT GGTCGCCTGG TCGGCACCGT CATTGAAGCG CGCTGGTGGG TGATTGGCAT CACCACCGTA TTCGCCCTCT GTGCCGTGGT TTACACCTTC TTCGCCACGC CGATTTATAG TGCCGACGCA CTGGTACAAA TCGAGCAAAA CAGCGGCAAT TCGTTAGTGC AGGACATTGG TTCGGCATTA GCCAACAAAC CGCCTGCATC GGACGCCGAG ATCCAGTTGA TTCGTTCGCG TCTGGTGCTT GGTAAAACGG TGGACGATCT CGACCTCGAT ATTGCAGTGA GCAAAAACAC GTTCCCGATT TTCGGTGCGG GCTGGGATCG CCTGATGGGA CGTCAGAACG AGACGGTGAA AGTGACCACC TTTAACCGCC CGAAAGAGAT GGCGGATCAG GTGTTTACGC TTAATGTGCT GGACAACAAA AACTACACCC TGAGCAGCGA CGGCGGCTTT AGCGCCCGGG GGCAAGCGGG CCAGATGCTG AAAAAAGAAG GCGTCACGCT GATGGTTGAA GCCATTCACG CCAGCCCGGG CAGTGAGTTT ACCGTCACCA AATACTCCAC GCTGGGGATG ATCAACCAAC TGCAAAACAG CCTGACGGTA ACGGAGAACG GCAAAGACGC TGGCGTTTTG AGCCTGACTT ATACCGGTGA AGATCGTGAA CAGATCCGCG ACATTCTTAA CAGCATCGCC CGTAACTATC AGGAACAAAA TATTGAGCGC AAATCGGCGG AAGCGTCGAA AAGCCTCGCC TTCCTCGCGC AACAGTTACC GGAAGTACGT AGCCGCTTGG ATGTTGCCGA AAACAAACTG AATGCCTTCC GTCAGGATAA AGATTCTGTT GATCTGCCGC TGGAAGCAAA AGCGGTGCTC GATTCGATGG TGAACATCGA TGCGCAGTTG AACGAACTGA CCTTTAAAGA GGCGGAAATC TCCAAGCTGT ACACCAAAGT TCACCCGGCG TACCGCACGC TGCTGGAGAA ACGTCAGGCG CTGGAAGACG AAAAAGCCAA ACTTAACGGT CGCGTAACGG CGATGCCGAA AACCCAGCAG GAGATTGTCC GTCTGACCCG CGATGTCGAG TCTGGTCAGC AGGTTTATAT GCAACTGCTG AATAAAGAGC AGGAGCTGAA AATCACCGAG GCCAGCACCG TCGGCGATGT GCGCATTGTT GACCCGGCAA TCACTCAGCC TGGCGTGCTG AAACCGAAGA AAGGGCTGAT TATCCTCGGC GCGATTATCC TTGGCCTGAT GCTTTCTATC GTGGGTGTGC TGCTGCGCTC GTTGTTTAAT CGCGGCATTG AAAGCCCGCA AGTACTGGAA GAACACGGTA TTAGCGTCTA TGCCAGCATC CCGCTGTCGG AATGGCAGAA AGCGCGTGAT AGCGTCAAAA CCATCAAAGG GATTAAACGC TATAAACAGA GCCAGCTACT GGCGGTGGGG AATCCAACCG ATCTGGCGAT TGAAGCCATC CGTAGTCTGC GTACCAGTTT GCACTTCGCG ATGATGCAGG CACAGAACAA TGTGTTGATG ATGACCGGGG TTAGCCCGTC AATTGGTAAA ACCTTTGTCT GCGCCAACCT GGCGGCGGTG ATCAGCCAGA CCAATAAACG CGTGTTGTTG ATCGACTGCG ATATGCGCAA AGGCTACACC CACGAGCTGT TGGGCACTAA TAACGTTAAT GGCCTGTCGG AAATTCTGAT TGGTCAGGGC GATATTACTA CCGCTGCTAA ACCGACCTCT ATTGCCAAAT TTGACCTGAT CCCGCGCGGT CAGGTGCCGC CAAATCCTTC TGAACTGTTG ATGAGCGAAC GCTTTGCCGA ACTGGTGAAC TGGGCGAGTA AAAACTATGA CCTGGTGTTG ATTGATACGC CGCCGATTCT GGCAGTGACC GATGCGGCAA TTGTTGGTCG TCATGTCGGA ACCACGTTAA TGGTGGCGCG TTATGCGGTC AACACATTGA AAGAAGTGGA AACCAGTCTG AGCCGCTTTG AGCAAAACGG TATTCCGGTG AAAGGGGTGA TTCTGAACTC CATCTTCCGC CGCGCCAGCG CGTATCAGGA TTATGGCTAT TACGAATACG AATATAAGTC GGATGCGAAA TAA
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Protein sequence | MTEKVKQHAA PVTGSDEIDI GRLVGTVIEA RWWVIGITTV FALCAVVYTF FATPIYSADA LVQIEQNSGN SLVQDIGSAL ANKPPASDAE IQLIRSRLVL GKTVDDLDLD IAVSKNTFPI FGAGWDRLMG RQNETVKVTT FNRPKEMADQ VFTLNVLDNK NYTLSSDGGF SARGQAGQML KKEGVTLMVE AIHASPGSEF TVTKYSTLGM INQLQNSLTV TENGKDAGVL SLTYTGEDRE QIRDILNSIA RNYQEQNIER KSAEASKSLA FLAQQLPEVR SRLDVAENKL NAFRQDKDSV DLPLEAKAVL DSMVNIDAQL NELTFKEAEI SKLYTKVHPA YRTLLEKRQA LEDEKAKLNG RVTAMPKTQQ EIVRLTRDVE SGQQVYMQLL NKEQELKITE ASTVGDVRIV DPAITQPGVL KPKKGLIILG AIILGLMLSI VGVLLRSLFN RGIESPQVLE EHGISVYASI PLSEWQKARD SVKTIKGIKR YKQSQLLAVG NPTDLAIEAI RSLRTSLHFA MMQAQNNVLM MTGVSPSIGK TFVCANLAAV ISQTNKRVLL IDCDMRKGYT HELLGTNNVN GLSEILIGQG DITTAAKPTS IAKFDLIPRG QVPPNPSELL MSERFAELVN WASKNYDLVL IDTPPILAVT DAAIVGRHVG TTLMVARYAV NTLKEVETSL SRFEQNGIPV KGVILNSIFR RASAYQDYGY YEYEYKSDAK
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