| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1592 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1735841 |
|---|
| End bp | 1736422 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | deoxycytidine triphosphate deaminase |
|---|
| Protein accession | ACX39257 |
|---|
| Protein GI | 260448835 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00335404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGT GTGACCGAGA TATTGAAGCC TGGCTTGATG AAGGCCGTTT GTCGATCAAC
CCACGTCCGC CAGTGGAGCG TATTAACGGC GCGACGGTGG ATGTACGCCT GGGCAATAAA
TTTCGTACCT TCCGTGGTCA CACGGCAGCG TTTATCGATC TGAGCGGTCC CAAAGATGAA
GTGAGCGCCG CGCTTGACCG CGTGATGAGC GATGAGATCG TTCTCGACGA GGGCGAGGCG
TTCTATCTTC ACCCAGGAGA GCTGGCGCTG GCGGTGACGC TGGAGTCGGT GACGCTGCCA
GCCGATCTGG TGGGCTGGCT GGACGGGCGT TCCTCACTGG CGCGTCTGGG GCTGATGGTG
CACGTCACCG CGCACCGCAT CGATCCGGGC TGGTCTGGTT GCATTGTGCT GGAGTTCTAC
AACTCCGGTA AGCTGCCGCT GGCGCTGCGT CCGGGCATGT TAATTGGTGC GCTGAGCTTT
GAGCCGCTTT CCGGCCCGGC GGTGCGACCT TACAACCGCC GTGAAGATGC GAAATATCGC
AACCAGCAGG GCGCGGTAGC CAGCCGAATC GATAAAGACT AA
|
|---|
| Protein sequence | MRLCDRDIEA WLDEGRLSIN PRPPVERING ATVDVRLGNK FRTFRGHTAA FIDLSGPKDE
VSAALDRVMS DEIVLDEGEA FYLHPGELAL AVTLESVTLP ADLVGWLDGR SSLARLGLMV
HVTAHRIDPG WSGCIVLEFY NSGKLPLALR PGMLIGALSF EPLSGPAVRP YNRREDAKYR
NQQGAVASRI DKD
|
|---|
| |