Gene EcDH1_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1559 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1696761 
End bp1698038 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content50% 
IMG OID 
Productnucleoside transporter 
Protein accessionACX39227 
Protein GI260448805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0908002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA CAGCAAAGCT GTCGTTCATG ATGTTTGTTG AATGGTTTAT CTGGGGCGCG 
TGGTTTGTGC CATTGTGGTT GTGGTTAAGT AAAAGCGGTT TTAGTGCCGG AGAAATTGGC
TGGTCGTATG CCTGTACCGC CATTGCGGCG ATCCTGTCGC CAATTCTGGT TGGCTCCATC
ACTGACCGCT TTTTCTCGGC GCAAAAAGTG CTGGCGGTAT TGATGTTCGC AGGCGCGCTG
CTGATGTATT TCGCTGCGCA ACAGACCACT TTTGCCGGGT TCTTCCCGTT ACTGCTGGCC
TACTCGCTAA CCTATATGCC GACCATTGCG CTGACTAACA GCATCGCTTT TGCCAACGTG
CCGGATGTTG AGCGTGATTT CCCGCGCATT CGTGTGATGG GCACTATCGG CTGGATTGCC
TCCGGTCTGG CATGTGGTTT CTTGCCGCAA ATACTGGGGT ATGCCGATAT CTCACCGACT
AACATCCCGC TGCTGATTAC CGCCGGAAGT TCTGCTCTGC TCGGTGTGTT TGCGTTTTTC
CTGCCCGACA CGCCACCAAA AAGCACCGGC AAAATGGATA TTAAAGTCAT GCTCGGCCTG
GATGCGCTGA TCCTGCTGCG CGATAAAAAC TTCCTCGTCT TTTTCTTCTG TTCATTCCTG
TTTGCGATGC CACTAGCGTT CTATTACATC TTTGCCAACG GTTATCTGAC CGAAGTTGGC
ATGAAAAACG CCACCGGCTG GATGACGCTC GGCCAGTTCT CTGAAATCTT CTTTATGCTG
GCATTGCCGT TTTTCACTAA ACGCTTTGGT ATCAAAAAGG TATTATTGCT TGGTCTGGTC
ACCGCTGCGA TCCGCTATGG CTTCTTTATT TACGGTAGTG CGGATGAATA TTTCACCTAC
GCGTTACTGT TCCTCGGTAT TTTGCTTCAC GGCGTAAGTT ACGATTTTTA CTACGTTACC
GCTTACATCT ATGTCGATAA AAAAGCCCCC GTGCATATGC GTACCGCTGC GCAGGGGCTG
ATCACGCTCT GCTGCCAGGG CTTCGGCAGT TTGCTCGGCT ATCGTCTTGG CGGTGTGATG
ATGGAAAAGA TGTTCGCTTA TCAGGAACCG GTAAACGGAC TGACTTTCAA CTGGTCCGGG
ATGTGGACTT TCGGCGCGGT GATGATTGCC ATTATCGCCG TGCTGTTCAT GATTTTTTTC
CGCGAATCCG ACAACGAAAT TACGGCTATC AAGGTCGATG ATCGCGATAT TGCGTTGACA
CAAGGGGAAG TTAAATGA
 
Protein sequence
MKTTAKLSFM MFVEWFIWGA WFVPLWLWLS KSGFSAGEIG WSYACTAIAA ILSPILVGSI 
TDRFFSAQKV LAVLMFAGAL LMYFAAQQTT FAGFFPLLLA YSLTYMPTIA LTNSIAFANV
PDVERDFPRI RVMGTIGWIA SGLACGFLPQ ILGYADISPT NIPLLITAGS SALLGVFAFF
LPDTPPKSTG KMDIKVMLGL DALILLRDKN FLVFFFCSFL FAMPLAFYYI FANGYLTEVG
MKNATGWMTL GQFSEIFFML ALPFFTKRFG IKKVLLLGLV TAAIRYGFFI YGSADEYFTY
ALLFLGILLH GVSYDFYYVT AYIYVDKKAP VHMRTAAQGL ITLCCQGFGS LLGYRLGGVM
MEKMFAYQEP VNGLTFNWSG MWTFGAVMIA IIAVLFMIFF RESDNEITAI KVDDRDIALT
QGEVK