Gene EcDH1_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1555 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1693208 
End bp1694026 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content48% 
IMG OID 
Productglycoside hydrolase family 25 
Protein accessionACX39223 
Protein GI260448801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCTCTC TATTATGCGC TCTTGGGCTA 
ATTTCCATCG TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT
CAGATTACAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCTATTCGC
ATTCCTGCCA GTTACACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC
TGGCAGCGGG TGGCAAAAAT GCGCGACAAT GGTATCCGCT TACAGTTTGC TTTTATTAAG
GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGC
GAAAATGGCC TGCTGCGTGG GGCGTATCAT TATTTCTCCC CGTCGGTATC CGCTTCAGTT
CAGGCGAGAT TATTTCTGCA AACGGTGGAT TTCTCACAAG GCGATTTCCC TGCCGTGCTG
GACGTAGAAG AACGGGGAAA ATTATCGGCA AAAGAATTAC GCAAGCGGGT AAGTCAGTGG
CTAAAAATGG TCGAAAAAAG TACGGGGAAA AAGCCGATTA TTTACTCAGG AGCCGTTTTT
TATCACACCA ATCTGGCGGG CTATTTCAAT GAATATCCGT GGTGGGTGGC TCACTACTAT
CAACGTCGTC CGGACAATGA CGGAATGGCC TGGCGCTTCT GGCAGCATTC CGACCGTGGA
CAGGTAGATG GCATCAATGG TCCGGTGGAT TTTAATGTAT TTAATGGCAC GGTGGAGGAG
TTGCAGGCAT TCGTTGATGG GATTAAAGAA ACGCCTTAA
 
Protein sequence
MQLRITSRKK LTSLLCALGL ISIVAIYPRQ TVNFFYSTAV QITDYIHFYG YRPVKSFAIR 
IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR
ENGLLRGAYH YFSPSVSASV QARLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW
LKMVEKSTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG
QVDGINGPVD FNVFNGTVEE LQAFVDGIKE TP