Gene EcDH1_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1526 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1657378 
End bp1658295 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content54% 
IMG OID 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionACX39195 
Protein GI260448773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.608789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACTCT TAAAGCTCTG GGCAGGTTCA CTGGTTATGT TGGCAGCCGT GAGCCTGCCG 
CTACAGGCGG CTTCCCCCGT TAAAGTCGGT TCAAAAATCG ATACCGAAGG TGCGCTACTC
GGCAATATCA TTTTGCAGGT GCTGGAAAGC CACGGCGTAC CGACGGTGAA TAAAGTGCAA
CTCGGAACGA CTCCTGTGGT GCGCGGGGCG ATTACTTCCG GTGAACTGGA TATCTATCCG
GAATATACCG GCAATGGCGC TTTCTTCTTT AAAGATGAAA ACGATGCAGC GTGGAAAAAC
GCGCAGCAAG GTTACGAGAA AGTCAAAAAG CTCGATTCGG AGCACAACAA GTTAATCTGG
CTGACGCCCG CGCCTGCAAA TAACACCTGG ACTATCGCCG TGCGTCAGGA TGTGGCAGAG
AAAAATAAAC TCACTTCGCT TGCCGACCTG AGTCGTTATC TGCAAGAGGG CGGCACCTTC
AAACTGGCAG CCTCGGCAGA GTTTATCGAA CGCGCCGATG CGTTACCCGC GTTTGAAAAA
GCCTATGGCT TTAAGCTCGG TCAGGATCAG TTGCTGTCAC TGGCTGGTGG CGACACGGCG
GTGACGATCA AAGCCGCTGC CCAGCAAACC TCTGGCGTTA ATGCTGCAAT GGCTTACGGC
ACTGACGGCC CGGTAGCGGC GCTGGGGCTG CAAACCTTAA GCGATCCGCA AGGTGTGCAA
CCTATCTACG CGCCTGCACC AGTGGTGCGT GAGTCGGTGT TGAGGGAGTA TCCGCAAATG
GCACAGTGGC TACAGCCAGT CTTCGCCAGC CTCGATGCAA AAACATTGCA GCAACTGAAT
GCCAGCATTG CTGTGGAAGG ACTGGATGCC AAAAAAGTGG CTGCCGACTA CCTGAAACAA
AAAGGGTGGA CGAAGTAA
 
Protein sequence
MPLLKLWAGS LVMLAAVSLP LQAASPVKVG SKIDTEGALL GNIILQVLES HGVPTVNKVQ 
LGTTPVVRGA ITSGELDIYP EYTGNGAFFF KDENDAAWKN AQQGYEKVKK LDSEHNKLIW
LTPAPANNTW TIAVRQDVAE KNKLTSLADL SRYLQEGGTF KLAASAEFIE RADALPAFEK
AYGFKLGQDQ LLSLAGGDTA VTIKAAAQQT SGVNAAMAYG TDGPVAALGL QTLSDPQGVQ
PIYAPAPVVR ESVLREYPQM AQWLQPVFAS LDAKTLQQLN ASIAVEGLDA KKVAADYLKQ
KGWTK