Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1526 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1657378 |
End bp | 1658295 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | ACX39195 |
Protein GI | 260448773 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.608789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACTCT TAAAGCTCTG GGCAGGTTCA CTGGTTATGT TGGCAGCCGT GAGCCTGCCG CTACAGGCGG CTTCCCCCGT TAAAGTCGGT TCAAAAATCG ATACCGAAGG TGCGCTACTC GGCAATATCA TTTTGCAGGT GCTGGAAAGC CACGGCGTAC CGACGGTGAA TAAAGTGCAA CTCGGAACGA CTCCTGTGGT GCGCGGGGCG ATTACTTCCG GTGAACTGGA TATCTATCCG GAATATACCG GCAATGGCGC TTTCTTCTTT AAAGATGAAA ACGATGCAGC GTGGAAAAAC GCGCAGCAAG GTTACGAGAA AGTCAAAAAG CTCGATTCGG AGCACAACAA GTTAATCTGG CTGACGCCCG CGCCTGCAAA TAACACCTGG ACTATCGCCG TGCGTCAGGA TGTGGCAGAG AAAAATAAAC TCACTTCGCT TGCCGACCTG AGTCGTTATC TGCAAGAGGG CGGCACCTTC AAACTGGCAG CCTCGGCAGA GTTTATCGAA CGCGCCGATG CGTTACCCGC GTTTGAAAAA GCCTATGGCT TTAAGCTCGG TCAGGATCAG TTGCTGTCAC TGGCTGGTGG CGACACGGCG GTGACGATCA AAGCCGCTGC CCAGCAAACC TCTGGCGTTA ATGCTGCAAT GGCTTACGGC ACTGACGGCC CGGTAGCGGC GCTGGGGCTG CAAACCTTAA GCGATCCGCA AGGTGTGCAA CCTATCTACG CGCCTGCACC AGTGGTGCGT GAGTCGGTGT TGAGGGAGTA TCCGCAAATG GCACAGTGGC TACAGCCAGT CTTCGCCAGC CTCGATGCAA AAACATTGCA GCAACTGAAT GCCAGCATTG CTGTGGAAGG ACTGGATGCC AAAAAAGTGG CTGCCGACTA CCTGAAACAA AAAGGGTGGA CGAAGTAA
|
Protein sequence | MPLLKLWAGS LVMLAAVSLP LQAASPVKVG SKIDTEGALL GNIILQVLES HGVPTVNKVQ LGTTPVVRGA ITSGELDIYP EYTGNGAFFF KDENDAAWKN AQQGYEKVKK LDSEHNKLIW LTPAPANNTW TIAVRQDVAE KNKLTSLADL SRYLQEGGTF KLAASAEFIE RADALPAFEK AYGFKLGQDQ LLSLAGGDTA VTIKAAAQQT SGVNAAMAYG TDGPVAALGL QTLSDPQGVQ PIYAPAPVVR ESVLREYPQM AQWLQPVFAS LDAKTLQQLN ASIAVEGLDA KKVAADYLKQ KGWTK
|
| |