Gene EcDH1_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1521 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1650480 
End bp1651058 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content54% 
IMG OID 
ProductSNARE associated Golgi protein-like protein 
Protein accessionACX39190 
Protein GI260448768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCA ATACACTTAT CTCACAATAT GGTTATGCCG CGCTGGTGAT CGGTAGCCTG 
GCGGAAGGTG AAACCGTGAC TTTGCTGGGA GGCGTTGCGG CGCATCAGGG GCTATTAAAG
TTCCCGCTGG TGGTACTTTC TGTGGCGCTT GGCGGCATGA TTGGCGACCA GGTGCTCTAT
CTGTGCGGGC GGCGGTTTGG CGGCAAGCTG TTACGCCGTT TCTCGAAACA TCAGGATAAA
ATTGAGCGGG CGCAGAAACT TATCCAACGC CATCCGTATC TGTTTGTCAT TGGTACGCGC
TTTATGTATG GCTTTCGGGT GATTGGCCCG ACGCTGATTG GTGCCAGCCA GCTGCCGCCG
AAAATCTTTC TGCCGCTGAA TATTCTCGGC GCATTTGCCT GGGCGTTGAT TTTTACCACT
ATTGGTTACG CTGGTGGTCA GGTGATTGCG CCGTGGTTGC ACAATCTCGA CCAGCATTTG
AAGCACTGGG TCTGGTTGAT TCTGGTCGTG GTTCTGGTGG TGGGCGTGCG CTGGTGGCTG
AAACGACGCG GGAAGAAAAA GCCGGATCAT CAGGCGTAA
 
Protein sequence
MDLNTLISQY GYAALVIGSL AEGETVTLLG GVAAHQGLLK FPLVVLSVAL GGMIGDQVLY 
LCGRRFGGKL LRRFSKHQDK IERAQKLIQR HPYLFVIGTR FMYGFRVIGP TLIGASQLPP
KIFLPLNILG AFAWALIFTT IGYAGGQVIA PWLHNLDQHL KHWVWLILVV VLVVGVRWWL
KRRGKKKPDH QA