Gene EcDH1_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1515 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1644131 
End bp1645015 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content55% 
IMG OID 
Productcytidine deaminase 
Protein accessionACX39185 
Protein GI260448763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCAC GTTTTCAAAC CGCTTTTGCC CAACTTGCGG ATAACTTGCA ATCTGCACTG 
GAACCTATTC TGGCAGACAA GTACTTCCCC GCTTTGTTGA CCGGGGAGCA AGTCTCATCG
CTGAAGAGCG CAACGGGGCT GGACGAAGAC GCGCTGGCAT TCGCACTACT TCCGCTGGCG
GCGGCCTGTG CGCGTACGCC ATTGTCGAAT TTTAATGTTG GCGCAATTGC GCGCGGTGTG
AGCGGAACCT GGTATTTCGG TGCCAATATG GAATTTATTG GTGCGACAAT GCAGCAAACC
GTTCATGCCG AACAAAGCGC GATCAGCCAC GCCTGGTTGA GTGGTGAAAA AGCGCTTGCA
GCCATCACCG TTAACTACAC GCCTTGTGGT CACTGCCGTC AGTTTATGAA TGAACTGAAC
AGCGGTCTGG ATCTGCGTAT TCATCTGCCG GGCCGCGAGG CACACGCGCT GCGTGACTAT
CTGCCAGATG CCTTTGGGCC GAAAGATCTG GAGATTAAAA CGCTGCTGAT GGACGAACAG
GATCACGGCT ATGCGCTGAC GGGTGATGCG CTTTCTCAGG CAGCGATTGC GGCGGCAAAC
CGTTCGCACA TGCCTTACAG TAAGTCGCCA AGCGGTGTCG CGCTGGAATG TAAAGACGGT
CGTATTTTCA GTGGCAGCTA CGCTGAAAAC GCCGCATTCA ACCCGACTCT GCCACCGTTG
CAGGGAGCGT TAATTCTGTT GAATCTCAAG GGTTATGATT ACCCGGATAT CCAGCGCGCG
GTTCTGGCAG AAAAAGCCGA TGCGCCGTTG ATTCAGTGGG ATGCCACCTC CGCAACGCTG
AAAGCTCTCG GCTGTCACAG TATCGACCGA GTGCTTCTCG CTTAA
 
Protein sequence
MHPRFQTAFA QLADNLQSAL EPILADKYFP ALLTGEQVSS LKSATGLDED ALAFALLPLA 
AACARTPLSN FNVGAIARGV SGTWYFGANM EFIGATMQQT VHAEQSAISH AWLSGEKALA
AITVNYTPCG HCRQFMNELN SGLDLRIHLP GREAHALRDY LPDAFGPKDL EIKTLLMDEQ
DHGYALTGDA LSQAAIAAAN RSHMPYSKSP SGVALECKDG RIFSGSYAEN AAFNPTLPPL
QGALILLNLK GYDYPDIQRA VLAEKADAPL IQWDATSATL KALGCHSIDR VLLA