Gene EcDH1_1474 details

Gene Information

• Locus tag: EcDH1_1474
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 1596376
• End bp: 1597071
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 53%
• Product: pseudouridine synthase
• Protein accession: ACX39144
• Protein GI: 260448722

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0000156324
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTTG ATAAATTTAT CGCACAGCAA CTCGGCGTTA GCCGTGCTAT TGCCGGGCGT 
GAAATCCGCG GCAATCGTGT CACCGTCGAT GGCGAAATCG TCCGTAATGC AGCGTTCAAA 
CTGCTTCCTG AACATGATGT CGCTTACGAT GGCAACCCGC TGGCGCAGCA ACACGGTCCA 
CGTTACTTCA TGCTCAATAA GCCTCAGGGC TATGTTTGCT CCACGGACGA CCCTGATCAC 
CCAACGGTGC TCTATTTTCT TGATGAACCG GTAGCGTGGA AACTGCATGC GGCGGGGCGG 
TTGGATATTG ATACCACCGG TCTGGTGCTG ATGACTGATG ATGGTCAGTG GTCGCACCGC 
ATTACTTCTC CGCGCCATCA TTGCGAGAAG ACCTATCTGG TGACACTGGA ATCACCTGTA 
GCTGACGATA CGGCAGAGCA ATTTGCTAAA GGCGTGCAGC TGCATAACGA AAAAGATCTC 
ACTAAGCCTG CGGTGCTGGA AGTGATTACC CCAACGCAGG TTCGTCTGAC CATCAGCGAA 
GGGCGTTATC ATCAGGTGAA ACGCATGTTC GCCGCCGTGG GTAACCACGT GGTTGAGCTG 
CATCGTGAAC GTATTGGCGG TATTACGCTG GATGCTGATT TAGCCCCCGG TGAATATCGT 
CCGTTAACTG AAGAAGAAAT TGCCAGCGTC GTCTAA 

 

Protein sequence

MRLDKFIAQQ LGVSRAIAGR EIRGNRVTVD GEIVRNAAFK LLPEHDVAYD GNPLAQQHGP 
RYFMLNKPQG YVCSTDDPDH PTVLYFLDEP VAWKLHAAGR LDIDTTGLVL MTDDGQWSHR 
ITSPRHHCEK TYLVTLESPV ADDTAEQFAK GVQLHNEKDL TKPAVLEVIT PTQVRLTISE 
GRYHQVKRMF AAVGNHVVEL HRERIGGITL DADLAPGEYR PLTEEEIASV V