Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1453 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1574106 |
End bp | 1576592 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | periplasmic nitrate reductase, large subunit |
Protein accession | ACX39123 |
Protein GI | 260448701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCA GTCGTCGTAG CTTTATGAAA GCTAACGCCG TTGCGGCCGC TGCGGCGGCT GCCGGTCTCA GCGTGCCGGG CGTTGCCCGC GCCGTTGTTG GTCAGCAGGA AGCCATCAAA TGGGATAAAG CGCCGTGCCG TTTCTGCGGT ACTGGTTGCG GCGTTCTGGT CGGAACGCAG CAGGGACGTG TGGTGGCCTG TCAGGGCGAC CCGGACGCAC CGGTTAACCG TGGCCTGAAC TGCATTAAGG GCTATTTCCT GCCCAAAATC ATGTACGGTA AAGACCGTTT GACGCAGCCG CTGCTGCGTA TGAAAAACGG TAAATATGAC AAAGAAGGCG AATTTACCCC AATCACCTGG GATCAGGCCT TCGATGTGAT GGAAGAGAAA TTCAAAACCG CCCTGAAAGA AAAAGGGCCG GAATCGATCG GTATGTTCGG TTCTGGTCAG TGGACTATCT GGGAAGGTTA TGCCGCGTCC AAGCTGTTTA AAGCGGGCTT CCGTTCGAAC AACATCGACC CGAACGCGCG TCACTGTATG GCGTCGGCAG TAGTTGGCTT TATGCGTACC TTTGGTATGG ATGAGCCGAT GGGCTGCTAT GACGACATCG AGCAGGCTGA CGCGTTTGTG CTGTGGGGCG CAAACATGGC GGAAATGCAC CCGATCCTCT GGTCGCGCAT CACTAACCGT CGTCTCTCTA ACCAGAACGT CACCGTGGCG GTGCTTTCTA CCTACCAGCA TCGTAGCTTC GAGCTGGCGG ATAACGGCAT CATCTTTACG CCGCAATCTG ACCTGGTGAT CCTGAACTAC ATCGCCAACT ATATCATTCA AAACAATGCG ATAAATCAGG ACTTCTTCAG CAAGCACGTT AACCTGCGCA AAGGGGCGAC GGACATCGGC TACGGTTTAC GTCCGACCCA TCCGCTGGAA AAAGCAGCGA AGAATCCGGG TTCTGACGCC TCCGAACCGA TGAGCTTTGA AGATTACAAA GCCTTCGTTG CCGAGTATAC GCTGGAAAAA ACTGCCGAAA TGACCGGCGT GCCGAAAGAC CAGTTAGAAC AACTGGCGCA GCTGTATGCC GATCCGAACA AGAAAGTCAT CTCCTACTGG ACGATGGGCT TCAACCAGCA TACTCGTGGC GTGTGGGCTA ACAACCTGGT CTACAACCTG CACCTGCTGA CCGGCAAAAT TTCCCAGCCG GGTTGCGGTC CGTTCTCCCT GACCGGGCAA CCTTCTGCGT GTGGTACTGC GCGTGAAGTG GGCACCTTTG CTCACCGTCT GCCTGCGGAC ATGGTGGTGA CCAACGAGAA ACACCGTGAT ATCTGCGAGA AGAAGTGGAA TATCCCGAGC GGCACCATTC CGGCGAAAAT CGGTCTGCAC GCGGTGGCAC AAGACCGTGC GCTGAAAGAC GGCAAACTGA ATGTTTACTG GACCATGTGT ACCAACAACA TGCAGGCCGG GCCGAACATC AATGAAGAGC GTATGCCGGG CTGGCGCGAT CCGCGCAACT TCATCATCGT CTCCGATCCG TATCCGACAG TCAGTGCGCT GGCCGCCGAC TTGATCCTGC CGACCGCAAT GTGGGTAGAG AAAGAGGGCG CTTACGGTAA CGCCGAACGC CGTACTCAGT TCTGGCGTCA ACAGGTACAG GCACCGGGCG AAGCGAAATC GGATCTCTGG CAGTTAGTCC AGTTCTCCCG CCGCTTCAAA ACTGAAGAAG TATGGCCGGA AGATCTGCTG GCGAAGAAAC CGGAACTGCG TGGCAAAACG CTGTACGAAG TGCTGTATGC CACACCGGAA GTGAGCAAAT TCCCGGTATC CGAACTGGCG GAAGATCAGC TGAACGATGA ATCCCGCGAG CTGGGCTTCT ATCTGCAAAA AGGGCTGTTC GAAGAGTACG CATGGTTTGG TCGCGGTCAC GGTCACGATC TGGCACCGTT CGATGACTAC CACAAAGCGC GCGGTCTGCG CTGGCCGGTG GTGAACGGTA AAGAAACGCA GTGGCGTTAC AGCGAAGGTA ACGACCCGTA CGTGAAAGCG GGCGAAGGCT ATAAGTTCTA CGGTAAACCG GATGGCAAAG CGGTGATCTT CGCACTGCCA TTCGAACCGG CGGCGGAAGC ACCGGATGAA GAGTACGACC TGTGGCTCTC TACCGGACGC GTTCTGGAGC ACTGGCACAC CGGCAGTATG ACTCGCCGTG TACCAGAACT GCACCGCGCC TTCCCGGAAG CGGTCCTGTT TATTCACCCG CTGGATGCGA AAGCGCGCGA TCTGCGCCGT GGCGACAAAG TGAAAGTGGT TTCTCGCCGT GGCGAAGTGA TCTCGATTGT TGAAACGCGC GGTCGTAACC GTCCGCCACA GGGCCTGGTG TACATGCCGT TCTTCGACGC CGCACAGTTG GTTAACAAAC TGACGCTGGA TGCGACCGAT CCGCTCTCGA AAGAGACGGA CTTCAAGAAG TGCGCGGTCA AACTGGAGAA GGTGTAA
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Protein sequence | MKLSRRSFMK ANAVAAAAAA AGLSVPGVAR AVVGQQEAIK WDKAPCRFCG TGCGVLVGTQ QGRVVACQGD PDAPVNRGLN CIKGYFLPKI MYGKDRLTQP LLRMKNGKYD KEGEFTPITW DQAFDVMEEK FKTALKEKGP ESIGMFGSGQ WTIWEGYAAS KLFKAGFRSN NIDPNARHCM ASAVVGFMRT FGMDEPMGCY DDIEQADAFV LWGANMAEMH PILWSRITNR RLSNQNVTVA VLSTYQHRSF ELADNGIIFT PQSDLVILNY IANYIIQNNA INQDFFSKHV NLRKGATDIG YGLRPTHPLE KAAKNPGSDA SEPMSFEDYK AFVAEYTLEK TAEMTGVPKD QLEQLAQLYA DPNKKVISYW TMGFNQHTRG VWANNLVYNL HLLTGKISQP GCGPFSLTGQ PSACGTAREV GTFAHRLPAD MVVTNEKHRD ICEKKWNIPS GTIPAKIGLH AVAQDRALKD GKLNVYWTMC TNNMQAGPNI NEERMPGWRD PRNFIIVSDP YPTVSALAAD LILPTAMWVE KEGAYGNAER RTQFWRQQVQ APGEAKSDLW QLVQFSRRFK TEEVWPEDLL AKKPELRGKT LYEVLYATPE VSKFPVSELA EDQLNDESRE LGFYLQKGLF EEYAWFGRGH GHDLAPFDDY HKARGLRWPV VNGKETQWRY SEGNDPYVKA GEGYKFYGKP DGKAVIFALP FEPAAEAPDE EYDLWLSTGR VLEHWHTGSM TRRVPELHRA FPEAVLFIHP LDAKARDLRR GDKVKVVSRR GEVISIVETR GRNRPPQGLV YMPFFDAAQL VNKLTLDATD PLSKETDFKK CAVKLEKV
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