Gene EcDH1_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1439 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1555103 
End bp1556929 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content49% 
IMG OID 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionACX39109 
Protein GI260448687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.36941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTATA TGAAGTGGAT TTATCCACGC CGCTTACGCA ATCAAATGAT CCTGATGGCA 
ATCCTGATGG TCATTGTCCC AACGCTTACT ATTGGTTATA TCGTAGAAAC GGAAGGACGT
TCAGCAGTCT TATCTGAAAA AGAGAAAAAA CTTTCTGCCG TGGTCAACCT GCTTAATCAG
GCACTAGGCG ATCGCTATGA TCTCTACATC GACTTACCAC GTGAGGAGCG TATCCGCGCA
TTAAATGCAG AACTTGCCCC CATTACCGAA AATATCACTC ACGCCTTCCC TGGCATCGGT
GCTGGTTATT ACAACAAAAT GCTGGATGCG ATAATCACCT ACGCGCCTTC AGCGCTATAT
CAGAATAATG TCGGCGTTAC CATTGCCGCA GATCACCCTG GTCGCGAAGT GATGCGTACA
AATACCCCTT TAGTTTATTC AGGCAGGCAG GTGCGCGGCG ATATTTTGAA TTCAATGCTC
CCCATTGAGC GTAATGGTGA AATCCTCGGC TATATCTGGG CCAATGAATT AACCGAAGAT
ATTCGCCGCC AGGCCTGGAA AATGGATGTG AGGATTATCA TTGTGCTCAC CGCTGGTTTG
CTGATAAGCC TGCTGTTGAT TGTCCTTTTC TCCCGTCGCC TGAGCGCCAA TATTGATATC
ATCACCGATG GCCTCTCGAC TCTGGCACAA AATATTCCCA CTCGATTACC ACAATTGCCC
GGTGAAATGG GGCAAATCAG TCAGAGTGTT AATAACCTCG CCCAGGCACT GCGTGAAACG
CGGACACTTA ACGATCTGAT TATTGAAAAC GCTGCCGATG GCGTCATTGC CATTGACCGC
CAGGGTGATG TAACCACCAT GAACCCAGCA GCAGAAGTTA TCACTGGCTA TCAACGCCAT
GAACTGGTAG GGCAGCCTTA CTCCATGTTG TTCGACAATA CTCAGTTCTA CAGTCCAGTA
CTGGATACGC TGGAACATGG CACCGAACAT GTGGCGCTGG AGATCAGTTT TCCAGGTCGT
GACCGCACCA TTGAACTCAG TGTCACTACC AGTCGTATTC ATAACACGCA CGGTGAAATG
ATAGGTGCTT TGGTGATTTT CTCTGATTTA ACTGCCCGCA AAGAAACCCA GCGCCGCATG
GCGCAAGCAG AACGCCTCGC CACACTGGGT GAGCTGATGG CTGGCGTCGC GCATGAAGTA
CGTAATCCGT TAACGGCTAT TCGTGGTTAT GTACAGATCT TGCGCCAACA AACCAGTGAC
CCAATACATC AGGAATATCT GTCCGTAGTA CTCAAAGAAA TCGATTCAAT TAACAAAGTT
ATTCAGCAAT TGCTCGAATT TTCACGTCCA CGCCACAGTC AATGGCAACA AGTCAGCCTC
AATGCATTGG TTGAAGAAAC TCTGGTACTG GTACAAACCG CCGGCGTACA AGCGCGGGTC
GACTTCATAA GCGAACTGGA TAATGAATTA AGCCCGATTA ACGCCGATCG TGAACTGCTC
AAACAGGTAC TACTGAATAT CCTGATCAAT GCCGTCCAGG CTATCAGCGC ACGAGGGAAA
ATTCGCATTC AAACCTGGCA ATACAGCGAC TCACAACAGG CCATTTCGAT AGAGGACAAC
GGCTGTGGCA TTGATCTCTC GCTGCAAAAA AAGATCTTCG ATCCCTTTTT CACCACCAAA
GCCTCAGGAA CCGGGCTTGG TCTGGCGTTA AGTCAACGCA TCATTAATGC CCATCAGGGT
GATATTCGCG TCGCCAGTTT GCCGGGCTAC GGCGCAACCT TCACGCTTAT TTTACCGATC
AACCCGCAGG GAAATCAGAC TGTATGA
 
Protein sequence
MHYMKWIYPR RLRNQMILMA ILMVIVPTLT IGYIVETEGR SAVLSEKEKK LSAVVNLLNQ 
ALGDRYDLYI DLPREERIRA LNAELAPITE NITHAFPGIG AGYYNKMLDA IITYAPSALY
QNNVGVTIAA DHPGREVMRT NTPLVYSGRQ VRGDILNSML PIERNGEILG YIWANELTED
IRRQAWKMDV RIIIVLTAGL LISLLLIVLF SRRLSANIDI ITDGLSTLAQ NIPTRLPQLP
GEMGQISQSV NNLAQALRET RTLNDLIIEN AADGVIAIDR QGDVTTMNPA AEVITGYQRH
ELVGQPYSML FDNTQFYSPV LDTLEHGTEH VALEISFPGR DRTIELSVTT SRIHNTHGEM
IGALVIFSDL TARKETQRRM AQAERLATLG ELMAGVAHEV RNPLTAIRGY VQILRQQTSD
PIHQEYLSVV LKEIDSINKV IQQLLEFSRP RHSQWQQVSL NALVEETLVL VQTAGVQARV
DFISELDNEL SPINADRELL KQVLLNILIN AVQAISARGK IRIQTWQYSD SQQAISIEDN
GCGIDLSLQK KIFDPFFTTK ASGTGLGLAL SQRIINAHQG DIRVASLPGY GATFTLILPI
NPQGNQTV