| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1412 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1516820 |
|---|
| End bp | 1518109 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | ACX39084 |
|---|
| Protein GI | 260448662 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.787988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CTTTGCTTGA CGCCGTGGTG AAGAAAAACC GTGTGCGTTT AATTCCGTTT
ATGTTGGCGC TGTATGTGCT GGCGTTTCTC GACCGTTCGA ATATCGGTTT TGCCAAACAG
ACCTACCAGA TTGATACCGG GTTGAGTAAT GAAGCTTATG CGCTGGGAGC AGGCATTTTC
TTTGTGGTAT ATGCGTTTCT GGGTGTTCCG GCGAATCTTT TGATGCGCAA ACTGGGGGCC
AGAACCTGGA TTGGTACGAC AACACTGCTG TGGGGATTTC TTTCGGCAGC CATGGCATGG
GCCGATACTG AAGCGAAATT TCTGATAGTT CGCACTCTGC TTCGTGCTGC GGAGGCCGGA
TTTTTCCCTG GTATGATTTA TCTCACCTCG CAATGGTTTC CGCAGCGTAA TCGCGCCAGC
ATTATGGGGC TGTTCTATAT GGGCGCACCG CTGGCGTTAA CACTGGGATC ACCGCTTTCC
GGCGCGCTGT TGGAGATGCA TGGATTTATG GGGCATCCCG GCTGGTTCTG GATGTTTGTG
ATTGAAGGAT TGTTGGCAGT CGGTGCTGGG GTATTCACAT TCTTTTGGCT TGATGACACA
CCGGAGCAGG CACGTTTTCT GAGTAAACAA GAAAAAACGT TGCTTATCAA TCAACTGGCA
AGTGAAGAAC AACAGAAAGT GACTTCTCGG CTGAGCGATG CGCTGCGTAA TGGCCGAGTC
TGGCAACTAG CGATTATCTA CCTGACCATT CAGGTGGCGG TTTACGGATT AATTTTCTTC
CTGCCGACCC AGGTTGCGGC ATTGCTGGGA ACAAAAGTGG GCTTTACAGC GTCGGTGGTC
ACCGCCATTC CGTGGGTTGC GGCCTTGTTT GGGACCTGGC TTATTCCGCG CTATTCCGAT
AAAACCGGCG AACGGCGTAA TGTCGCAGCG CTGACATTAC TGGCGGCGGG CATTGGTATT
GGTCTGTCCG GGCTGCTTTC TCCAGTAATG GCGATCGTAG CGCTGTGTGT TGCAGCTATC
GGGTTTATTG CCGTGCAGCC AGTGTTCTGG ACGATGCCGA CACAACTGCT TTCCGGTACG
GCGCTGGCTG CGGGAATTGG TTTTGTAAAC CTGTTTGGTG CAGTGGGCGG GTTTATTGCC
CCGATCCTGC GCGTGAAAGC AGAAACGTTA TTTGCCAGCG ATGCGGCGGG ATTACTGACG
CTGGCAGCGG TGGCGGTCAT CGGTTCGCTG ATTATTTTCA CTCTGCGTGT AAATCGCACT
GTTGCGCAGA CCGACGTGGC ACATCATTAA
|
|---|
| Protein sequence | MSTALLDAVV KKNRVRLIPF MLALYVLAFL DRSNIGFAKQ TYQIDTGLSN EAYALGAGIF
FVVYAFLGVP ANLLMRKLGA RTWIGTTTLL WGFLSAAMAW ADTEAKFLIV RTLLRAAEAG
FFPGMIYLTS QWFPQRNRAS IMGLFYMGAP LALTLGSPLS GALLEMHGFM GHPGWFWMFV
IEGLLAVGAG VFTFFWLDDT PEQARFLSKQ EKTLLINQLA SEEQQKVTSR LSDALRNGRV
WQLAIIYLTI QVAVYGLIFF LPTQVAALLG TKVGFTASVV TAIPWVAALF GTWLIPRYSD
KTGERRNVAA LTLLAAGIGI GLSGLLSPVM AIVALCVAAI GFIAVQPVFW TMPTQLLSGT
ALAAGIGFVN LFGAVGGFIA PILRVKAETL FASDAAGLLT LAAVAVIGSL IIFTLRVNRT
VAQTDVAHH
|
|---|
| |