Gene EcDH1_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1342 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1445288 
End bp1445950 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content57% 
IMG OID 
ProductPhosphogluconate dehydratase 
Protein accessionACX39014 
Protein GI260448592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0363237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAGTA AGTTTCAGAA TCGGTTAGTG GGCACGATCG TGCTGGTGGC GCTGGGGGTG 
ATTGTACTTC CAGGGCTGCT GGACGGGCAG AAAAAACATT ATCAGGATGA GTTCGCGGCT
ATCCCGCTGG TGCCGAAAGC GGGCGATCGT GATGAGCCTG ATATGATGCC AGCCGCCACC
CAGGCGTTAC CGACGCAGCC GCCGGAAGGC GCAGCGGAAG AGGTGCGGGC AGGTGATGCC
GCAGCACCGT CGCTCGATCC GGCCACTATT GCAGCCAATA ACACCGAGTT TGAACCGGAA
CCTGCACCGG TCGCCCCACC GAAGCCGAAA CCGGTGGAGC CGCCTAAACC AAAGGTTGAA
GCACCACCTG CGCCGAAGCC AGAACCGAAG CCGGTCGTGG AAGAAAAAGC TGCACCGACG
GGTAAAGCCT ATGTTGTGCA ACTGGGTGCG CTGAAAAATG CCGATAAAGT GAATGAGATT
GTCGGTAAGC TGCGCGGTGC CGGTTATCGG GTTTATACGT CGCCATCCAC GCCAGTGCAG
GGTAAAATTA CCCGTATTCT GGTTGGGCCG GATGCCTCGA AAGATAAGCT GAAAGGTTCG
CTGGGTGAGT TGAAGCAACT TTCTGGCTTA AGTGGCGTGG TAATGGGCTA TACGCCGAAT
TAA
 
Protein sequence
MASKFQNRLV GTIVLVALGV IVLPGLLDGQ KKHYQDEFAA IPLVPKAGDR DEPDMMPAAT 
QALPTQPPEG AAEEVRAGDA AAPSLDPATI AANNTEFEPE PAPVAPPKPK PVEPPKPKVE
APPAPKPEPK PVVEEKAAPT GKAYVVQLGA LKNADKVNEI VGKLRGAGYR VYTSPSTPVQ
GKITRILVGP DASKDKLKGS LGELKQLSGL SGVVMGYTPN