Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1338 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1441336 |
End bp | 1442148 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | tRNA pseudouridine synthase A |
Protein accession | ACX39010 |
Protein GI | 260448588 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.556339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACC AGCAACAACC GCCAGTTTAT AAAATTGCGC TGGGCATTGA GTACGACGGC AGTAAGTATT ACGGCTGGCA ACGGCAGAAC GAAGTCCGCA GTGTGCAGGA GAAGCTGGAA AAGGCGCTCT CCCAGGTGGC GAACGAACCC ATCACCGTCT TCTGCGCCGG GCGTACTGAC GCAGGGGTAC ACGGTACCGG GCAGGTTGTG CATTTCGAAA CAACCGCGCT GCGCAAAGAC GCGGCGTGGA CCTTGGGCGT AAATGCGAAT TTACCTGGTG ACATCGCTGT GCGTTGGGTT AAAACTGTAC CTGATGATTT TCATGCCCGA TTTAGCGCCA CGGCTCGCCG TTATCGCTAC ATCATCTACA ATCATCGGCT GCGCCCGGCG GTACTGAGTA AAGGGGTAAC CCATTTTTAC GAACCGCTGG ACGCTGAACG GATGCATCGG GCTGCGCAAT GCTTGCTGGG CGAGAATGAT TTCACCTCGT TCCGTGCGGT GCAGTGCCAG TCCCGAACCC CGTGGCGCAA CGTTATGCAT ATTAATGTCA CGCGTCACGG TCCTTATGTG GTGGTAGATA TTAAAGCGAA TGCTTTTGTA CATCATATGG TCAGGAATAT TGTCGGCAGC CTGATGGAAG TCGGTGCCCA CAACCAGCCG GAGAGCTGGA TAGCAGAGTT GCTGGCGGCA AAGGACAGAA CGCTGGCGGC AGCAACGGCA AAAGCGGAAG GGCTGTATCT GGTCGCGGTG GATTACCCTG ACCGGTATGA TCTTCCAAAA CCGCCAATGG GCCCGCTATT TCTGGCGGAC TAA
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Protein sequence | MSDQQQPPVY KIALGIEYDG SKYYGWQRQN EVRSVQEKLE KALSQVANEP ITVFCAGRTD AGVHGTGQVV HFETTALRKD AAWTLGVNAN LPGDIAVRWV KTVPDDFHAR FSATARRYRY IIYNHRLRPA VLSKGVTHFY EPLDAERMHR AAQCLLGEND FTSFRAVQCQ SRTPWRNVMH INVTRHGPYV VVDIKANAFV HHMVRNIVGS LMEVGAHNQP ESWIAELLAA KDRTLAAATA KAEGLYLVAV DYPDRYDLPK PPMGPLFLAD
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