| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1323 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1426382 |
|---|
| End bp | 1426921 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | Fimbrial protein |
|---|
| Protein accession | ACX38995 |
|---|
| Protein GI | 260448573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.539494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT CAATGATTCA GTCCGGTGGT TACGTCCTGT TAGCGGGGCT GATATTGGCA
ATGAGTAGCA CGTTATTCGC GGCAGATAAT AATCTGCATT TCTCCGGTAA TTTATTAAGT
AAATCCTGTG CGCTGGTGGT GGATGGCCAA TATCTGGCAG AGGTGCGCTT TCCCACGGTC
AGTCGTCAGG ATTTGAACGT TGCAGGCCAG TCCGCTCGTG TACCCGTAGT CTTTAAGCTG
AAAGATTGCA AAGGGCCGGC GGGATACAAC GTAAAAGTCA CGCTCACGGG GGTAGAAGAC
AGCGAACAAC CCGGTTTTCT GGCACTGGAT ACGTCATCAA CCGCTCAGGG AGTGGGAATT
GGCATGGAAA AAACCGACGG AATGCAGGTT GCCATCAACA ATACAAATGG GGCGACCTTT
GCGCTAACCA ATGGCAATAA CGATATCAAT TTCAGAGCCT GGCTACAGGC GAAAAGCGGC
CGTGATGTGA CGATCGGTGA ATTTACCGCC TCTTTAACTG CGACATTTGA GTATATTTAA
|
|---|
| Protein sequence | MNKSMIQSGG YVLLAGLILA MSSTLFAADN NLHFSGNLLS KSCALVVDGQ YLAEVRFPTV
SRQDLNVAGQ SARVPVVFKL KDCKGPAGYN VKVTLTGVED SEQPGFLALD TSSTAQGVGI
GMEKTDGMQV AINNTNGATF ALTNGNNDIN FRAWLQAKSG RDVTIGEFTA SLTATFEYI
|
|---|
| |