Gene EcDH1_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1293 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1399343 
End bp1400278 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content48% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX38967 
Protein GI260448545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCC TTCGTGAAAT AAGAAATCGG CTGCTTAACG GCTGGCAATT ATCAAAAATG 
CATACTTTTG AAGTGGCTGC CAGGCATCAG TCCTTCGCCC TGGCGGCAGA GGAATTGTCG
CTGAGCCCCA GTGCGGTAAG TCACCGTATC AATCAGCTGG AAGAAGAATT GGGCATTCAG
TTGTTTGTTC GTTCCCATCG CAAAGTGGAA TTAACGCACG AGGGGAAACG TGTTTATTGG
GCGCTAAAAT CGTCGCTGGA TACCCTGAAC CAGGAAATTC TTGATATCAA AAATCAGGAG
TTATCGGGAA CGTTAACTCT GTATTCCCGG CCCTCTATCG CCCAATGCTG GTTGGTGCCC
GCATTAGGTG ACTTTACACG CCGGTATCCG TCTATTTCGC TCACCGTGCT CACTGGTAAT
GACAACGTCA ATCTGCAACG TGCCGGAATC GATTTGGCGA TCTACTTTGA TGATGCGCCG
TCAGCGCAAC TCACTCATCA CTTTCTGATG GATGAAGAAA TCCTGCCAGT ATGTAGCCCG
GAATACGCTC AAAGACATGC TTTAACCAAC ACGGTAATTA ACCTGTGTCA CTGTACGTTG
CTCCATGACA GACAGGCATG GAGCAACGAC TCCGGTACGG ATGAATGGCA TAGTTGGGCG
CAACATTATG CGGTTAATTT GCCGACATCT TCTGGAATTG GCTTTGATCG TTCTGATTTA
GCTGTTATTG CCGCGATGAA TCATATTGGG GTGGCGATGG GAAGAAAACG CCTGGTACAA
AAAAGGCTTG CCAGTGGTGA GCTCGTCGCG CCGTTTGGCG ATATGACGGT GAAATGCCAT
CAGCATTATT ACATCACCAC ATTACCGGGC AGGCAGTGGC CAAAAATTGA AGCGTTTATT
ATCTGGCTAA GAGAACAGGT AAAAACCACT TCATAA
 
Protein sequence
MEPLREIRNR LLNGWQLSKM HTFEVAARHQ SFALAAEELS LSPSAVSHRI NQLEEELGIQ 
LFVRSHRKVE LTHEGKRVYW ALKSSLDTLN QEILDIKNQE LSGTLTLYSR PSIAQCWLVP
ALGDFTRRYP SISLTVLTGN DNVNLQRAGI DLAIYFDDAP SAQLTHHFLM DEEILPVCSP
EYAQRHALTN TVINLCHCTL LHDRQAWSND SGTDEWHSWA QHYAVNLPTS SGIGFDRSDL
AVIAAMNHIG VAMGRKRLVQ KRLASGELVA PFGDMTVKCH QHYYITTLPG RQWPKIEAFI
IWLREQVKTT S