Gene EcDH1_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1278 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1378677 
End bp1379915 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content55% 
IMG OID 
Productaminotransferase class I and II 
Protein accessionACX38952 
Protein GI260448530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACA CTCGCCCTGA ACGTCGCTTT ACGCGCATTG ATCGTCTCCC GCCCTACGTT 
TTTAACATCA CCGCTGAACT GAAAATGGCT GCGCGTCGGC GCGGCGAAGA TATTATCGAT
TTCAGCATGG GTAACCCGGA CGGTGCGACT CCGCCGCATA TCGTCGAAAA ATTATGTACT
GTGGCCCAGC GCCCGGACAC GCATGGTTAC TCCACTTCAC GCGGCATTCC GCGGTTACGT
CGCGCCATTT CCCGCTGGTA TCAGGATCGC TACGACGTTG AAATCGACCC GGAATCAGAA
GCCATCGTCA CTATTGGTTC GAAAGAGGGC CTGGCGCATC TGATGCTGGC GACGCTGGAT
CATGGTGACA CGGTGCTGGT GCCGAATCCA AGTTACCCGA TCCATATTTA TGGCGCGGTG
ATTGCCGGGG CGCAGGTACG CTCAGTGCCG CTGGTGGAAG GTGTCGATTT CTTCAACGAA
CTGGAGCGAG CCATTCGTGA AAGTTATCCG AAACCGAAGA TGATGATCCT CGGCTTCCCG
TCAAACCCAA CCGCGCAATG CGTGGAACTG GAGTTCTTCG AAAAAGTAGT GGCGCTGGCG
AAACGCTACG ATGTGCTGGT GGTCCATGAC CTGGCCTATG CCGATATCGT CTACGATGGC
TGGAAAGCGC CGTCAATTAT GCAGGTACCG GGTGCACGCG ATGTGGCAGT CGAGTTCTTT
ACGCTGTCGA AAAGCTACAA CATGGCGGGC TGGCGTATCG GCTTTATGGT TGGCAACAAA
ACGCTGGTCA GCGCCCTGGC TCGTATTAAA AGCTATCACG ATTACGGCAC CTTTACGCCG
TTGCAGGTGG CGGCGATTGC GGCGCTGGAG GGCGATCAAC AGTGCGTGCG CGACATTGCC
GAACAGTACA AACGCCGCCG TGATGTATTG GTTAAAGGGC TGCATGAAGC GGGCTGGATG
GTTGAAATGC CGAAGGCTTC GATGTATGTC TGGGCGAAAA TCCCGGAACC ATATGCGGCC
ATGGGATCGC TGGAATTTGC CAAGAAGCTC CTTAACGAAG CGAAGGTTTG TGTCTCGCCG
GGGATTGGCT TTGGCGACTA TGGTGATACG CATGTTCGCT TTGCACTGAT TGAAAACCGC
GACCGTATTC GTCAGGCCAT CAGAGGGATT AAAGCGATGT TCCGTGCCGA CGGTTTACTA
CCCGCCAGCA GCAAACATAT TCACGAAAAC GCGGAATAA
 
Protein sequence
MADTRPERRF TRIDRLPPYV FNITAELKMA ARRRGEDIID FSMGNPDGAT PPHIVEKLCT 
VAQRPDTHGY STSRGIPRLR RAISRWYQDR YDVEIDPESE AIVTIGSKEG LAHLMLATLD
HGDTVLVPNP SYPIHIYGAV IAGAQVRSVP LVEGVDFFNE LERAIRESYP KPKMMILGFP
SNPTAQCVEL EFFEKVVALA KRYDVLVVHD LAYADIVYDG WKAPSIMQVP GARDVAVEFF
TLSKSYNMAG WRIGFMVGNK TLVSALARIK SYHDYGTFTP LQVAAIAALE GDQQCVRDIA
EQYKRRRDVL VKGLHEAGWM VEMPKASMYV WAKIPEPYAA MGSLEFAKKL LNEAKVCVSP
GIGFGDYGDT HVRFALIENR DRIRQAIRGI KAMFRADGLL PASSKHIHEN AE