Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1277 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 1376604 |
End bp | 1378301 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | signal transduction histidine kinase, LytS |
Protein accession | ACX38951 |
Protein GI | 260448529 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCACGAAA TATTCAACAT GCTGCTGGCG GTCTTCGATC GGGCAGCGTT AATGCTTATC TGCCTGTTCT TTCTCATCCG TATCCGCCTG TTTCGCGAAC TGTTGCACAA GTCGGCGCAC TCCCCAAAAG AATTGCTCGC CGTTACCGCC ATTTTCTCGC TGTTCGCCCT GTTCAGCACC TGGTCCGGCG TTCCCGTAGA AGGCTCGCTG GTGAACGTAC GTATTATCGC GGTGATGTCC GGCGGGATTC TGTTTGGCCC GTGGGTAGGC ATCATTACCG GCGTGATTGC GGGTATTCAC CGGTATTTAA TTGATATCGG CGGCGTGACG GCGATCCCCT GCTTTATCAC CAGCATTCTG GCGGGTTGTA TATCGGGCTG GATCAACCTG AAAATCCCCA AAGCACAGCG CTGGCGCGTC GGTATTCTCG GCGGCATGTT GTGTGAGACG TTGACCATGA TTCTGGTAAT TGTCTGGGCA CCAACTACCG CGTTGGGGAT CGATATCGTC TCTAAAATCG GCATTCCAAT GATCCTCGGT AGCGTCTGTA TCGGCTTTAT TGTGCTTCTG GTGCAAAGCG TTGAGGGCGA AAAAGAGGCC AGCGCCGCGC GGCAGGCCAA GCTGGCGCTG GATATCGCCA ACAAAACGCT ACCGCTGTTT CGCCATGTCA ATAGCGAGTC ATTACGCAAG GTCTGCGAAA TTATCCGCGA TGACATTCAC GCCGATGCGG TGGCGATTAC TAATACCGAT CATGTGCTGG CCTATGTTGG CGTGGGTGAA CATAACTATC AGAATGGCGA TGACTTCATT AGCCCGACTA CCCGTCAGGC GATGAATTAC GGAAAAATCA TCATTAAAAA CAATGATGAA GCCCACCGCA CACCAGAGAT TCATTCCATG CTGGTGATCC CATTGTGGGA GAAAGGGGTC GTGACCGGAA CGCTGAAAAT TTACTACTGC CACGCGCATC AGATCACCTC GTCATTACAG GAAATGGCGG TCGGTCTGTC GCAAATCATC TCCACGCAAC TGGAGGTTTC ACGCGCCGAG CAGCTACGTG AAATGGCAAA TAAGGCAGAG CTTCGCGCCC TGCAAAGCAA AATTAATCCC CATTTTCTGT TTAACGCTCT GAACGCTATT TCATCGTCAA TCCGTCTGAA TCCGGATACC GCTCGCCAGT TGATCTTTAA TCTGTCGCGT TATCTGCGCT ATAACATTGA ATTAAAAGAC GATGAGCAAA TCGATATCAA AAAAGAGCTG TATCAAATTA AAGACTATAT TGCCATTGAG CAGGCCCGCT TTGGTGACAA GCTGACGGTT ATCTATGATA TTGATGAAGA GGTGAATTGC TGCATTCCCA GCCTGCTGAT CCAGCCGTTG GTGGAGAACG CCATTGTCCA CGGTATTCAG CCTTGCAAAG GTAAAGGCGT TGTCACCATC AGCGTTGCAG AGTGCGGAAA TCGGGTACGC ATTGCGGTGC GAGATACCGG GCACGGCATC GATCCAAAGG TGATTGAGCG GGTCGAAGCG AATGAAATGC CGGGCAATAA AATTGGCCTG CTGAATGTCC ATCATCGCGT GAAGTTATTG TATGGCGAGG GGCTGCATAT CCGCCGCCTG GAGCCGGGGA CGGAAATTGC GTTTTACATT CCTAACCAAC GCACCCCAGT CGCCTCACAG GCTACGTTAT TGCTTTGA
|
Protein sequence | MHEIFNMLLA VFDRAALMLI CLFFLIRIRL FRELLHKSAH SPKELLAVTA IFSLFALFST WSGVPVEGSL VNVRIIAVMS GGILFGPWVG IITGVIAGIH RYLIDIGGVT AIPCFITSIL AGCISGWINL KIPKAQRWRV GILGGMLCET LTMILVIVWA PTTALGIDIV SKIGIPMILG SVCIGFIVLL VQSVEGEKEA SAARQAKLAL DIANKTLPLF RHVNSESLRK VCEIIRDDIH ADAVAITNTD HVLAYVGVGE HNYQNGDDFI SPTTRQAMNY GKIIIKNNDE AHRTPEIHSM LVIPLWEKGV VTGTLKIYYC HAHQITSSLQ EMAVGLSQII STQLEVSRAE QLREMANKAE LRALQSKINP HFLFNALNAI SSSIRLNPDT ARQLIFNLSR YLRYNIELKD DEQIDIKKEL YQIKDYIAIE QARFGDKLTV IYDIDEEVNC CIPSLLIQPL VENAIVHGIQ PCKGKGVVTI SVAECGNRVR IAVRDTGHGI DPKVIERVEA NEMPGNKIGL LNVHHRVKLL YGEGLHIRRL EPGTEIAFYI PNQRTPVASQ ATLLL
|
| |