Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1258 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1354495 |
End bp | 1355379 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | ACX38932 |
Protein GI | 260448510 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000000639687 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACGCG TATACAGAAC AGATCTTAAG TTGCTCCGTT ATTTTCTTGC CGTAGCGGAA GAGTTGCATT TTGGCCGCGC AGCAGCGCGT TTAAATATGT CTCAGCCTCC GCTCAGCATT CATATTAAAG AGCTGGAAAA TCAACTCGGC ACGCAGCTTT TTATTCGCCA TTCGCGCAGC GTCGTACTGA CACACGCGGG CAAAATCTTG ATGGAAGAAT CGCGTCGATT GCTGGTGAAT GCTAATAATG TATTGGCTCG GATTGAACAA ATAGGTCGGG GAGAAGCAGG GCGGATTGAA CTCGGCGTAG TGGGAACGGC AATGTGGGGA CGGATGCGCC CGGTTATGCG GCGATTCCTC AGGGAAAATC CTAACGTTGA CGTTCTTTTT CGCGAAAAGA TGCCCGCGAT GCAAATGGCC TTGCTGGAAC GCCGCGAACT TGATGCCGGG ATCTGGCGAA TGGCGACAGA ACCACCGACT GGTTTTACCA GCTTACGGTT GCATGAATCG GCGTTTCTGG TGGCGATGCC TGAAGAGCAT CATCTCTCAT CATTTTCCAC CGTCCCGCTG GAAGCGCTAC GTGACGAGTA TTTTGTTACA ATGCCGCCCG TTTACACTGA CTGGGATTTT TTGCAGCGAG TTTGCCAGCA GGTGGGATTT TCACCGGTTG TTATTCGCGA AGTTAATGAA CCGCAAACGG TACTCGCTAT GGTCAGTATG GGCATTGGTA TCACATTGAT AGCGGACAGC TACGCACAAA TGAACTGGCC AGGTGTCATT TTCCGTCCGC TCAAACAGCG CATCCCTGCA GATTTATATA TTGTTTATGA AACACAGCAG GTGACGCCCG CGATGGTTAA GCTGTTGGCT GCATTGACAC AGTAG
|
Protein sequence | MERVYRTDLK LLRYFLAVAE ELHFGRAAAR LNMSQPPLSI HIKELENQLG TQLFIRHSRS VVLTHAGKIL MEESRRLLVN ANNVLARIEQ IGRGEAGRIE LGVVGTAMWG RMRPVMRRFL RENPNVDVLF REKMPAMQMA LLERRELDAG IWRMATEPPT GFTSLRLHES AFLVAMPEEH HLSSFSTVPL EALRDEYFVT MPPVYTDWDF LQRVCQQVGF SPVVIREVNE PQTVLAMVSM GIGITLIADS YAQMNWPGVI FRPLKQRIPA DLYIVYETQQ VTPAMVKLLA ALTQ
|
| |