Gene EcDH1_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1258 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1354495 
End bp1355379 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content51% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX38932 
Protein GI260448510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000639687 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGCG TATACAGAAC AGATCTTAAG TTGCTCCGTT ATTTTCTTGC CGTAGCGGAA 
GAGTTGCATT TTGGCCGCGC AGCAGCGCGT TTAAATATGT CTCAGCCTCC GCTCAGCATT
CATATTAAAG AGCTGGAAAA TCAACTCGGC ACGCAGCTTT TTATTCGCCA TTCGCGCAGC
GTCGTACTGA CACACGCGGG CAAAATCTTG ATGGAAGAAT CGCGTCGATT GCTGGTGAAT
GCTAATAATG TATTGGCTCG GATTGAACAA ATAGGTCGGG GAGAAGCAGG GCGGATTGAA
CTCGGCGTAG TGGGAACGGC AATGTGGGGA CGGATGCGCC CGGTTATGCG GCGATTCCTC
AGGGAAAATC CTAACGTTGA CGTTCTTTTT CGCGAAAAGA TGCCCGCGAT GCAAATGGCC
TTGCTGGAAC GCCGCGAACT TGATGCCGGG ATCTGGCGAA TGGCGACAGA ACCACCGACT
GGTTTTACCA GCTTACGGTT GCATGAATCG GCGTTTCTGG TGGCGATGCC TGAAGAGCAT
CATCTCTCAT CATTTTCCAC CGTCCCGCTG GAAGCGCTAC GTGACGAGTA TTTTGTTACA
ATGCCGCCCG TTTACACTGA CTGGGATTTT TTGCAGCGAG TTTGCCAGCA GGTGGGATTT
TCACCGGTTG TTATTCGCGA AGTTAATGAA CCGCAAACGG TACTCGCTAT GGTCAGTATG
GGCATTGGTA TCACATTGAT AGCGGACAGC TACGCACAAA TGAACTGGCC AGGTGTCATT
TTCCGTCCGC TCAAACAGCG CATCCCTGCA GATTTATATA TTGTTTATGA AACACAGCAG
GTGACGCCCG CGATGGTTAA GCTGTTGGCT GCATTGACAC AGTAG
 
Protein sequence
MERVYRTDLK LLRYFLAVAE ELHFGRAAAR LNMSQPPLSI HIKELENQLG TQLFIRHSRS 
VVLTHAGKIL MEESRRLLVN ANNVLARIEQ IGRGEAGRIE LGVVGTAMWG RMRPVMRRFL
RENPNVDVLF REKMPAMQMA LLERRELDAG IWRMATEPPT GFTSLRLHES AFLVAMPEEH
HLSSFSTVPL EALRDEYFVT MPPVYTDWDF LQRVCQQVGF SPVVIREVNE PQTVLAMVSM
GIGITLIADS YAQMNWPGVI FRPLKQRIPA DLYIVYETQQ VTPAMVKLLA ALTQ