| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1254 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 1351081 |
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| End bp | 1351845 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | ACX38928 |
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| Protein GI | 260448506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.000811085 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC ATCTTTTAAC TCTGACACTT TCCTCTATAT TAGCGATACC TGTTGTATCT
CATGCAGAAT TTAAAGGCGG TTTTGCAGAT ATCGGCGTGC ATTATCTGGA CTGGACCAGC
CGGACTACCG AAAAATCGTC GACCAAATCA CACAAAGATG ATTTTGGTTA TCTTGAATTT
GAAGGTGGCG CTAACTTTAG TTGGGGAGAA ATGTACGGGT TCTTCGACTG GGAAAACTTC
TATAACGGTC GCCATAATAA ACCAGGTAGC GAGCAGCGTT ATACCTTTAA AAATACCAAC
CGTATTTACC TGGGTGACAC CGGATTTAAT CTCTACTTGC ATGCGTATGG CACCTACGGT
TCTGCGAATC GCGTGAATTT CCACGACGAT ATGTTCCTGT ACGGTATCGG CTACAATTTC
ACCGGCAGCG GTTGGTGGTT CAAACCGTTC TTTGCTAAGC GTTATACAGA TCAAACCTAT
TACACTGGCG ACAACGGCTA TGTCGCCGGC TGGGTTGCAG GTTACAACTT TATGCTGGGC
AGCGAGAAAT TCACTCTTAC CAACTGGAAC GAGTACGAGT TTGACCGTGA CGCTACCTAT
GCAGCGGGTA ATGGCGGTAA AGAAGGGCTG AATGGCGCAG TTGCACTGTG GTGGAATGCA
ACATCACACA TTACTACGGG GATTCAGTAT CGATATGCGG ATGACAAACT GGGCGAAGAT
TTTTACCAGG ATGCGATAAT CTACTCCATC AAATTTAACT TCTGA
|
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| Protein sequence | MKKHLLTLTL SSILAIPVVS HAEFKGGFAD IGVHYLDWTS RTTEKSSTKS HKDDFGYLEF
EGGANFSWGE MYGFFDWENF YNGRHNKPGS EQRYTFKNTN RIYLGDTGFN LYLHAYGTYG
SANRVNFHDD MFLYGIGYNF TGSGWWFKPF FAKRYTDQTY YTGDNGYVAG WVAGYNFMLG
SEKFTLTNWN EYEFDRDATY AAGNGGKEGL NGAVALWWNA TSHITTGIQY RYADDKLGED
FYQDAIIYSI KFNF
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