Gene EcDH1_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1231 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1327566 
End bp1328870 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content52% 
IMG OID 
Productbeta-lactamase 
Protein accessionACX38905 
Protein GI260448483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGA CAATGCTCTA TCTTTCTCTG CTGGCTGTTA GTTGTAGCGT CAGCGCCGCA 
AAATACCCTG TTCTGACAGA AAGCTCGCCA GAGAAAGCAG GGTTTAACGT CGAACGGCTT
AACCAGATGG ATCGCTGGAT TAGCCAGCAA GTTGATGTCG GTTATCCCAG CGTAAACCTG
CTGATCATTA AAGATAATCA GATTGTGTAT CGCAAAGCCT GGGGAGCGGC GAAAAAGTAC
GATGGCAGCG TGTTGATGGA ACAGCCTGTC AAAGCCACCA CCGGGACGCT GTATGACCTG
GCCTCAAACA CCAAAATGTA CGCCACGAAC TTCGCCCTGC AAAAGCTGAT GAGCGAAGGC
AAACTGCATC CTGACGATCG GATTGCGAAA TATATTCCGG GGTTTGCCGA TAGTCCAAAT
GACACCATTA AAGGCAAAAA CACCCTGCGG ATTTCTGACC TGCTGCATCA CAGCGGCGGT
TTCCCGGCAG ATCCGCAATA CCCGAATAAA GCGGTCGCGG GCGCGTTATA TTCCCAGGAT
AAAGGCCAGA CGCTGGAGAT GATCAAGCGC ACGCCGCTGG AATATCAGCC CGGCAGCAAA
CATATCTACA GCGATGTCGA TTATATGCTG CTTGGATTTA TCGTCGAGTC GGTTACCGGT
CAGCCGCTTG ACCGCTATGT TGAAGAGTCG ATTTATCGCC CGCTCGGCCT GACACATACG
GTATTTAACC CGCTGCTGAA AGGCTTTAAA CCGCAACAAA TTGCCGCCAC GGAATTGAAC
GGCAATACCC GCGATGGCGT GATCCATTTC CCGAATATCC GCACCTCCAC TCTCTGGGGT
CAGGTGCACG ATGAAAAAGC CTTTTATTCG ATGGGCGGCG TTTCCGGGCA CGCAGGTTTG
TTTTCCAATA CCGGCGATAT TGCGGTGTTA ATGCAAACGA TGCTGAACGG CGGGGGCTAT
GGTGATGTGC AGCTGTTCAA TGCGGAAACG GTGAAGATGT TCACCACCAG CTCTAAGGAA
GATGCCACTT TTGGCCTCGG CTGGCGCGTG AATGGTAATG CCACCATGAC GCCGACGTTT
GGCACGCTGG CAAGCCCGCA AACCTACGGT CACACTGGCT GGACCGGAAC GGTGACCGTT
ATCGATCCGG TGAATCATAT GACGATTGTG ATGTTAAGCA ACAAGCCACA TTCGCCGGTT
GCCGATCCGC AAAAGAATCC CAATATGTTC GAAAGCGGTC AGTTGCCGAT TGCAACTTAT
GGTTGGGTAG TTGATCAGGT GTATGCGGCG TTAAAGCAGA AGTAA
 
Protein sequence
MKRTMLYLSL LAVSCSVSAA KYPVLTESSP EKAGFNVERL NQMDRWISQQ VDVGYPSVNL 
LIIKDNQIVY RKAWGAAKKY DGSVLMEQPV KATTGTLYDL ASNTKMYATN FALQKLMSEG
KLHPDDRIAK YIPGFADSPN DTIKGKNTLR ISDLLHHSGG FPADPQYPNK AVAGALYSQD
KGQTLEMIKR TPLEYQPGSK HIYSDVDYML LGFIVESVTG QPLDRYVEES IYRPLGLTHT
VFNPLLKGFK PQQIAATELN GNTRDGVIHF PNIRTSTLWG QVHDEKAFYS MGGVSGHAGL
FSNTGDIAVL MQTMLNGGGY GDVQLFNAET VKMFTTSSKE DATFGLGWRV NGNATMTPTF
GTLASPQTYG HTGWTGTVTV IDPVNHMTIV MLSNKPHSPV ADPQKNPNMF ESGQLPIATY
GWVVDQVYAA LKQK