Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1200 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 1293054 |
End bp | 1296167 |
Gene Length | 3114 bp |
Protein Length | 1037 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | ACX38874 |
Protein GI | 260448452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATT TCTTTATTGA TCGCCCCATT TTTGCCTGGG TGCTGGCAAT CCTGTTGTGT CTGACAGGTA CCCTGGCGAT TTTTTCATTG CCCGTTGAAC AATACCCCGA TCTCGCGCCA CCGAATGTGC GAGTGACCGC TAACTATCCC GGCGCATCGG CCCAGACGCT GGAAAACACC GTGACCCAGG TTATCGAGCA AAATATGACC GGCCTCGATA ATCTCATGTA TATGTCATCT CAGAGCAGTG GCACCGGTCA GGCATCTGTC ACTTTAAGTT TTAAAGCAGG CACCGATCCG GACGAAGCCG TGCAGCAAGT ACAAAACCAG CTGCAATCAG CCATGCGAAA GTTACCGCAG GCGGTGCAAA ATCAGGGCGT GACGGTGCGT AAAACCGGCG ATACCAACAT TCTGACCATT GCCTTCGTCT CTACCGATGG TTCGATGGAT AAACAGGATA TTGCTGATTA TGTTGCCAGT AATATTCAGG ACCCGTTAAG CCGCGTGAAT GGCGTCGGGG ATATCGATGC CTATGGTTCG CAATATTCCA TGCGTATCTG GCTGGACCCG GCGAAACTCA ACAGTTTCCA GATGACGGCT AAAGATGTCA CTGATGCCAT TGAGTCACAG AACGCGCAGA TTGCGGTTGG GCAACTTGGT GGTACACCTT CCGTCGATAA GCAGGCGCTC AACGCCACCA TTAACGCCCA GTCACTGCTG CAAACACCAG AACAGTTCCG CGATATCACC TTGCGGGTCA ATCAGGACGG CTCAGAGGTA AGGCTGGGCG ATGTCGCCAC CGTCGAAATG GGGGCGGAGA AATACGATTA TCTTAGCCGC TTCAATGGTA AGCCAGCCTC CGGGCTGGGG GTAAAACTGG CCTCCGGCGC TAACGAAATG GCGACAGCGG AGCTGGTGCT CAATCGTCTC GACGAGCTGG CGCAGTATTT CCCGCATGGA CTGGAATACA AGGTGGCGTA TGAAACCACC TCGTTTGTTA AAGCCTCCAT TGAAGACGTG GTGAAAACGC TGCTGGAAGC TATCGCTCTG GTTTTCCTCG TTATGTATCT GTTCCTGCAA AACTTCCGCG CCACGCTGAT ACCCACTATC GCCGTGCCGG TGGTGTTGAT GGGAACCTTC TCCGTACTTT ACGCCTTCGG TTACAGCGTC AACACCTTAA CCATGTTCGC GATGGTGCTG GCGATCGGTC TGCTGGTGGA TGACGCCATC GTGGTGGTGG AAAACGTCGA ACGTATTATG AGTGAGGAAG GACTCACTCC TCGCGAAGCC ACACGTAAAT CGATGGGGCA GATCCAGGGG GCACTGGTCG GGATTGCGAT GGTTCTTTCG GCGGTATTTG TACCAATGGC CTTCTTCGGC GGCACCACCG GTGCCATCTA TCGCCAGTTC TCTATTACCA TTGTTGCGGC GATGGTGCTG TCAGTACTGG TAGCGATGAT CCTCACTCCG GCTCTGTGTG CCACACTACT TAAGCCACTG AAAAAAGGTG AGCATCATGG GCAAAAAGGC TTTTTTGCCT GGTTTAACCA GATGTTTAAC CGCAACGCCG AACGCTACGA AAAAGGGGTG GCGAAAATTC TCCACCGTAG CCTGCGCTGG ATTGTGATTT ATGTCCTGCT GCTTGGCGGC ATGGTGTTCC TGTTCCTGCG TTTGCCGACG TCGTTCTTAC CGCTGGAAGA CCGTGGCATG TTTACTACCT CGGTACAGTT GCCCAGCGGT TCAACGCAAC AACAGACCCT GAAAGTCGTT GAGCAAATCG AGAAATACTA CTTCACCCAT GAAAAAGACA ACATCATGTC GGTGTTTGCC ACCGTTGGTT CTGGCCCTGG GGGTAACGGG CAAAACGTGG CGCGAATGTT TATCCGCCTG AAAGACTGGA GCGAACGCGA CAGTAAGACC GGCACCTCGT TTGCCATTAT CGAGCGTGCA ACGAAGGCGT TTAACCAAAT TAAAGAAGCT CGCGTTATCG CCAGCAGCCC GCCAGCAATT AGCGGTCTTG GTAGTTCTGC AGGTTTTGAT ATGGAGTTGC AGGACCACGC TGGAGCGGGT CACGATGCGC TGATGGCAGC ACGTAATCAG TTGCTGGCGC TGGCGGCGGA AAACCCGGAG CTAACCCGTG TGCGCCATAA CGGCCTCGAC GACAGTCCGC AGTTGCAGAT TGATATCGAC CAGCGTAAAG CTCAGGCGCT GGGCGTTGCT ATCGACGATA TTAACGACAC ACTGCAAACC GCCTGGGGTT CGAGCTATGT GAATGACTTT ATGGATCGCG GTCGCGTGAA GAAAGTCTAT GTGCAGGCAG CTGCGCCGTA TCGCATGCTG CCAGATGACA TCAATCTCTG GTATGTCCGA AATAAAGATG GCGGCATGGT GCCCTTCTCT GCTTTCGCGA CCTCACGCTG GGAAACAGGC TCGCCGCGTC TGGAACGCTA TAACGGTTAT TCTGCGGTTG AGATTGTTGG GGAAGCCGCA CCGGGGGTCA GTACCGGTAC GGCGATGGAT ATTATGGAAT CGTTAGTGAA GCAGCTGCCA AACGGCTTTG GTCTGGAGTG GACGGCGATG TCGTATCAGG AGCGGCTTTC CGGCGCGCAG GCTCCGGCGC TGTACGCCAT TTCCTTGCTG GTGGTATTCC TGTGTCTGGC TGCGTTGTAT GAAAGCTGGT CGGTGCCGTT CTCGGTAATG CTGGTCGTGC CGCTGGGGGT AATCGGCGCG CTGCTGGCAA CCTGGATGCG CGGGCTGGAA AACGACGTTT ACTTCCAGGT GGGCCTGTTA ACGGTCATTG GTTTATCGGC GAAAAACGCC ATCCTGATCG TCGAGTTTGC TAACGAGATG AACCAAAAAG GCCACGACCT GTTTGAAGCG ACGCTCCACG CCTGCCGTCA GCGTTTACGC CCGATTCTGA TGACCTCGCT GGCATTTATC TTCGGCGTAT TGCCAATGGC AACCAGCACG GGTGCCGGTT CCGGTGGTCA GCATGCGGTG GGTACTGGCG TAATGGGCGG GATGATTTCG GCCACTATTC TGGCTATTTA CTTCGTGCCG CTGTTCTTTG TGCTGGTGCG CCGCCGCTTC CCGCTGAAGC CGCGCCCGGA ATAA
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Protein sequence | MANFFIDRPI FAWVLAILLC LTGTLAIFSL PVEQYPDLAP PNVRVTANYP GASAQTLENT VTQVIEQNMT GLDNLMYMSS QSSGTGQASV TLSFKAGTDP DEAVQQVQNQ LQSAMRKLPQ AVQNQGVTVR KTGDTNILTI AFVSTDGSMD KQDIADYVAS NIQDPLSRVN GVGDIDAYGS QYSMRIWLDP AKLNSFQMTA KDVTDAIESQ NAQIAVGQLG GTPSVDKQAL NATINAQSLL QTPEQFRDIT LRVNQDGSEV RLGDVATVEM GAEKYDYLSR FNGKPASGLG VKLASGANEM ATAELVLNRL DELAQYFPHG LEYKVAYETT SFVKASIEDV VKTLLEAIAL VFLVMYLFLQ NFRATLIPTI AVPVVLMGTF SVLYAFGYSV NTLTMFAMVL AIGLLVDDAI VVVENVERIM SEEGLTPREA TRKSMGQIQG ALVGIAMVLS AVFVPMAFFG GTTGAIYRQF SITIVAAMVL SVLVAMILTP ALCATLLKPL KKGEHHGQKG FFAWFNQMFN RNAERYEKGV AKILHRSLRW IVIYVLLLGG MVFLFLRLPT SFLPLEDRGM FTTSVQLPSG STQQQTLKVV EQIEKYYFTH EKDNIMSVFA TVGSGPGGNG QNVARMFIRL KDWSERDSKT GTSFAIIERA TKAFNQIKEA RVIASSPPAI SGLGSSAGFD MELQDHAGAG HDALMAARNQ LLALAAENPE LTRVRHNGLD DSPQLQIDID QRKAQALGVA IDDINDTLQT AWGSSYVNDF MDRGRVKKVY VQAAAPYRML PDDINLWYVR NKDGGMVPFS AFATSRWETG SPRLERYNGY SAVEIVGEAA PGVSTGTAMD IMESLVKQLP NGFGLEWTAM SYQERLSGAQ APALYAISLL VVFLCLAALY ESWSVPFSVM LVVPLGVIGA LLATWMRGLE NDVYFQVGLL TVIGLSAKNA ILIVEFANEM NQKGHDLFEA TLHACRQRLR PILMTSLAFI FGVLPMATST GAGSGGQHAV GTGVMGGMIS ATILAIYFVP LFFVLVRRRF PLKPRPE
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