Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1178 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 1269850 |
End bp | 1271862 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | transcriptional regulator, NifA subfamily, Fis Family |
Protein accession | ACX38852 |
Protein GI | 260448430 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATGT CAGACGAGGC GATGTTTGCC CCGCCACAAG GAATAACAAT TGAAGCGGTA AACGGAATGC TCGCGGAGCG GTTAGCACAG AAACACGGCA AGGCGTCTTT ATTACGCGCC TTCATCCCGC TGCCGCCGCC GTTCAGCCCG GTACAACTTA TTGAACTGCA TGTTCTCAAA AGCAACTTCT ATTACCGCTA CCATGATGAT GGCAGCGATG TGACGGCAAC AACAGAGTAT CAGGGCGAGA TGGTCGATTA TTCGCGTCAC GCCGTCCTTC TCGGCAGTAG TGGAATGGCG GAGCTACGCT TTATTCGCAC CCACGGCAGT CGTTTTACTT CCCAGGATTG CACACTGTTT AACTGGCTGG CGCGGATAAT CACCCCGGTT CTGCAATCAT GGCTCAATGA TGAAGAACAG CAGGTGGCGC TGCGTTTGCT GGAGAAAGAT CGCGATCATC ATCGGGTACT GGTTGATATT ACTAATGCAG TGCTGTCACA TCTTGATCTC GACGATCTGA TCGCTGACGT CGCTCGTGAG ATCCATCATT TTTTCGGTCT GGCTTCAGTC AGTATGGTAC TGGGCGATCA TCGAAAGAAC GAGAAGTTCA GCCTGTGGTG CAGCGATCTT TCTGCCTCAC ATTGTGCGTG TCTGCCACGC TGTATGCCTG GCGAAAGTGT ATTGCTGACA CAAACGCTAC AAACCCGACA ACCGACCTTG ACGCACCGTG CAGATGATCT GTTTCTCTGG CAACGCGACC CGTTATTACT CTTACTTGCA TCTAACGGCT GCGAATCTGC GCTCCTTATA CCGCTTACCT TTGGCAACCA TACACCGGGT GCATTGTTGC TGGCGCATAC CTCTTCCACT CTCTTTAGTG AGGAAAACTG CCAGCTACTA CAACACATAG CCGATCGCAT CGCTATTGCC GTTGGCAATG CCGATGCCTG GCGTAGCATG ACCGATTTGC AGGAAAGTTT GCAGCAAGAA AACCACCAGC TTAGCGAGCA GCTCCTTTCG AATCTGGGCA TCGGTGACAT TATCTATCAA AGCCAGGCAA TGGAAGACCT GCTCCAGCAG GTAGATATTG TGGCGAAGAG CGACAGTACG GTGTTGATTT GTGGTGAAAC CGGAACTGGC AAAGAGGTGA TCGCCAGAGC GATCCATCAA CTTAGCCCGC GACGCGACAA GCCGCTGGTC AAAATCAACT GCGCTGCCAT CCCCGCCAGT CTTCTGGAAA GTGAGTTATT CGGTCATGAC AAAGGGGCGT TTACTGGTGC GATTAATACC CATCGTGGTC GTTTTGAAAT TGCCGATGGC GGCACGTTGT TTCTCGATGA AATTGGCGAT CTGCCGTTAG AACTTCAGCC TAAACTGCTG CGCGTATTGC AGGAGCGGGA GATTGAGCGT CTCGGCGGGA GTAGAACGAT CCCGGTGAAT GTCAGAGTCA TTGCCGCCAC CAACCGTGAT TTGTGGCAAA TGGTTGAAGA TCGCCAGTTT CGCAGCGATC TCTTTTATCG CCTGAATGTC TTCCCACTGG AATTGCCGCC GCTACGCGAC CGTCCGGAAG ATATCCCTCT TTTAGCAAAA CATTTCACGC AAAAAATGGC GCGCCATATG AATCGCGCAA TTGACGCCAT CCCGACCGAG GCACTACGCC AGTTGATGTC GTGGGATTGG CCGGGCAACG TGCGCGAGCT GGAAAACGTG ATTGAGCGGG CGGTACTGTT GACTCGTGGT AACAGTCTGA ATTTACATCT AAATGTCCGA CAAAGCCGTT TACTGCCGAC GCTAAATGAA GATTCAGCGC TTCGCAGTTC AATGGCGCAG TTACTGCACC CGACGACGCC AGAGAATGAC GAAGAAGAAC GTCAGCGCAT TGTTCAGGTA TTGCGAGAAA CCAATGGCAT TGTTGCCGGG CCCCGTGGCG CAGCGACGCG ATTAGGGATG AAGCGCACCA CGCTGCTGTC ACGAATGCAG CGGCTGGGGA TCTCGGTTCG CGAGGTGTTG TAA
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Protein sequence | MAMSDEAMFA PPQGITIEAV NGMLAERLAQ KHGKASLLRA FIPLPPPFSP VQLIELHVLK SNFYYRYHDD GSDVTATTEY QGEMVDYSRH AVLLGSSGMA ELRFIRTHGS RFTSQDCTLF NWLARIITPV LQSWLNDEEQ QVALRLLEKD RDHHRVLVDI TNAVLSHLDL DDLIADVARE IHHFFGLASV SMVLGDHRKN EKFSLWCSDL SASHCACLPR CMPGESVLLT QTLQTRQPTL THRADDLFLW QRDPLLLLLA SNGCESALLI PLTFGNHTPG ALLLAHTSST LFSEENCQLL QHIADRIAIA VGNADAWRSM TDLQESLQQE NHQLSEQLLS NLGIGDIIYQ SQAMEDLLQQ VDIVAKSDST VLICGETGTG KEVIARAIHQ LSPRRDKPLV KINCAAIPAS LLESELFGHD KGAFTGAINT HRGRFEIADG GTLFLDEIGD LPLELQPKLL RVLQEREIER LGGSRTIPVN VRVIAATNRD LWQMVEDRQF RSDLFYRLNV FPLELPPLRD RPEDIPLLAK HFTQKMARHM NRAIDAIPTE ALRQLMSWDW PGNVRELENV IERAVLLTRG NSLNLHLNVR QSRLLPTLNE DSALRSSMAQ LLHPTTPEND EEERQRIVQV LRETNGIVAG PRGAATRLGM KRTTLLSRMQ RLGISVREVL
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