Gene EcDH1_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1161 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1251227 
End bp1252804 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content54% 
IMG OID 
ProductGMP synthase, large subunit 
Protein accessionACX38835 
Protein GI260448413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0469795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA ACATTCATAA GCATCGCATC CTCATTCTGG ACTTCGGTTC TCAGTACACT 
CAACTGGTTG CGCGCCGCGT GCGTGAGCTG GGTGTTTACT GCGAACTGTG GGCGTGGGAT
GTGACAGAAG CACAAATTCG TGACTTCAAT CCAAGCGGCA TTATTCTTTC CGGCGGCCCG
GAAAGTACTA CTGAAGAAAA CAGTCCGCGT GCGCCGCAGT ATGTCTTTGA AGCAGGCGTA
CCGGTATTCG GCGTTTGCTA TGGCATGCAG ACCATGGCAA TGCAGTTGGG CGGTCACGTT
GAAGCCTCTA ACGAACGTGA ATTTGGCTAC GCGCAGGTTG AAGTCGTAAA CGACAGCGCA
CTGGTTCGCG GTATCGAAGA TGCGCTGACC GCAGACGGTA AACCGCTGCT CGATGTCTGG
ATGAGCCACG GCGATAAAGT TACCGCTATT CCGTCCGACT TCATCACCGT AGCCAGCACC
GAAAGCTGCC CGTTTGCCAT TATGGCTAAC GAAGAAAAAC GCTTCTATGG CGTACAGTTC
CACCCGGAAG TGACTCATAC CCGCCAGGGT ATGCGCATGC TGGAGCGTTT TGTGCGTGAT
ATCTGCCAGT GTGAAGCCCT GTGGACGCCA GCGAAAATTA TCGACGATGC TGTAGCTCGC
ATCCGCGAGC AGGTAGGCGA CGATAAAGTC ATCCTCGGCC TCTCTGGTGG TGTGGATTCC
TCCGTAACCG CAATGCTGCT GCACCGCGCT ATCGGTAAAA ACCTGACTTG CGTATTCGTC
GACAACGGCC TGCTGCGCCT CAACGAAGCA GAGCAGGTTC TGGATATGTT TGGCGATCAC
TTTGGTCTTA ACATTGTTCA CGTACCGGCA GAAGATCGCT TCCTGTCAGC GCTGGCTGGC
GAAAACGATC CGGAAGCAAA ACGTAAAATC ATCGGTCGCG TTTTCGTTGA AGTATTCGAT
GAAGAAGCGC TGAAACTGGA AGACGTGAAG TGGCTGGCGC AGGGCACCAT CTACCCTGAC
GTTATCGAAT CTGCGGCGTC TGCAACCGGT AAAGCACACG TCATCAAATC TCACCACAAC
GTGGGCGGCC TGCCGAAAGA GATGAAGATG GGCCTGGTTG AACCGCTGAA AGAGCTGTTC
AAAGACGAAG TGCGTAAGAT TGGTCTGGAG CTGGGCCTGC CGTACGACAT GCTGTACCGT
CACCCGTTCC CGGGACCAGG CCTTGGCGTT CGTGTTCTGG GTGAAGTGAA GAAAGAGTAC
TGTGACCTGC TGCGCCGTGC TGACGCCATC TTCATTGAAG AACTGCGTAA AGCGGACCTG
TACGACAAAG TCAGCCAGGC GTTCACTGTG TTCCTGCCGG TACGTTCCGT TGGCGTAATG
GGCGATGGTC GTAAGTATGA CTGGGTTGTC TCTCTGCGTG CTGTCGAAAC CATCGACTTT
ATGACCGCAC ACTGGGCGCA TCTGCCGTAC GATTTCCTCG GTCGCGTTTC CAACCGCATT
ATCAATGAAG TGAACGGTAT TTCCCGCGTG GTGTATGACA TCAGCGGCAA GCCGCCAGCT
ACCATTGAGT GGGAATGA
 
Protein sequence
MTENIHKHRI LILDFGSQYT QLVARRVREL GVYCELWAWD VTEAQIRDFN PSGIILSGGP 
ESTTEENSPR APQYVFEAGV PVFGVCYGMQ TMAMQLGGHV EASNEREFGY AQVEVVNDSA
LVRGIEDALT ADGKPLLDVW MSHGDKVTAI PSDFITVAST ESCPFAIMAN EEKRFYGVQF
HPEVTHTRQG MRMLERFVRD ICQCEALWTP AKIIDDAVAR IREQVGDDKV ILGLSGGVDS
SVTAMLLHRA IGKNLTCVFV DNGLLRLNEA EQVLDMFGDH FGLNIVHVPA EDRFLSALAG
ENDPEAKRKI IGRVFVEVFD EEALKLEDVK WLAQGTIYPD VIESAASATG KAHVIKSHHN
VGGLPKEMKM GLVEPLKELF KDEVRKIGLE LGLPYDMLYR HPFPGPGLGV RVLGEVKKEY
CDLLRRADAI FIEELRKADL YDKVSQAFTV FLPVRSVGVM GDGRKYDWVV SLRAVETIDF
MTAHWAHLPY DFLGRVSNRI INEVNGISRV VYDISGKPPA TIEWE