Gene EcDH1_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1157 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1246406 
End bp1247878 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content52% 
IMG OID 
Productsmall GTP-binding protein 
Protein accessionACX38831 
Protein GI260448409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000141762 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACCTG TGGTCGCGCT TGTCGGGCGC CCTAACGTAG GAAAATCCAC GTTATTTAAC 
CGTCTAACTC GCACCCGAGA TGCGCTGGTT GCGGATTTCC CGGGTCTGAC TCGTGACCGT
AAGTACGGTC GTGCGGAAAT TGAAGGCCGT GAGTTTATCT GTATTGATAC CGGCGGGATT
GATGGCACAG AAGACGGTGT AGAAACCCGC ATGGCGGAAC AGTCGCTGCT GGCGATTGAA
GAAGCGGACG TCGTACTGTT TATGGTGGAT GCGCGCGCGG GCCTGATGCC GGCAGATGAA
GCGATTGCCA AACATCTGCG CTCCCGTGAA AAACCGACCT TCCTGGTGGC AAACAAAACT
GACGGTCTGG ATCCCGATCA GGCAGTGGTT GATTTCTACT CGCTTGGTTT AGGTGAAATC
TACCCGATCG CCGCGTCTCA CGGTCGTGGC GTATTAAGTC TGCTGGAGCA TGTGCTGCTG
CCGTGGATGG AAGATCTCGC ACCGCAAGAG GAAGTCGACG AAGACGCTGA ATACTGGGCG
CAATTTGAAG CGGAAGAGAA CGGCGAAGAA GAAGAGGAAG ACGACTTCGA CCCGCAAAGT
CTGCCGATCA AACTGGCGAT TGTGGGTCGT CCGAACGTAG GTAAGTCTAC ACTCACTAAC
CGTATTCTTG GTGAAGAGCG CGTTGTTGTT TACGACATGC CTGGCACGAC GCGTGACAGC
ATCTACATCC CAATGGAACG CGATGGACGT GAGTATGTGC TCATTGACAC CGCTGGCGTA
CGTAAACGCG GCAAAATCAC CGATGCTGTA GAGAAATTCT CCGTAATCAA AACGTTGCAG
GCCATTGAAG ACGCCAACGT GGTGATGTTA GTGATTGATG CGCGCGAAGG TATTTCCGAT
CAGGATCTCT CGCTGCTGGG CTTTATTCTC AATAGTGGGC GCTCACTTGT CATTGTGGTG
AATAAGTGGG ATGGCCTGAG TCAGGAAGTG AAAGAGCAGG TGAAAGAAAC GCTGGACTTC
CGTCTGGGCT TTATCGATTT TGCTCGTGTG CACTTTATCT CTGCCTTGCA CGGCAGTGGT
GTTGGTAACT TGTTTGAATC AGTACGTGAA GCGTATGACA GCTCCACCCG TCGTGTGGGG
ACCTCTATGC TGACGCGCAT CATGACGATG GCTGTTGAAG ATCACCAACC GCCGCTGGTA
CGCGGTCGTC GTGTGAAGCT GAAATATGCC CACGCCGGTG GTTATAACCC GCCGATTGTG
GTGATTCACG GTAATCAGGT GAAAGACCTG CCTGATTCCT ACAAGCGCTA CTTGATGAAC
TACTTCCGCA AATCGCTGGA CGTAATGGGA TCGCCGATTC GTATTCAGTT CAAAGAAGGG
GAAAACCCGT ATGCGAATAA GCGTAACACC CTGACGCCAA CCCAGATGCG TAAACGTAAG
CGTCTGATGA AGCACATCAA GAAAAATAAA TAA
 
Protein sequence
MVPVVALVGR PNVGKSTLFN RLTRTRDALV ADFPGLTRDR KYGRAEIEGR EFICIDTGGI 
DGTEDGVETR MAEQSLLAIE EADVVLFMVD ARAGLMPADE AIAKHLRSRE KPTFLVANKT
DGLDPDQAVV DFYSLGLGEI YPIAASHGRG VLSLLEHVLL PWMEDLAPQE EVDEDAEYWA
QFEAEENGEE EEEDDFDPQS LPIKLAIVGR PNVGKSTLTN RILGEERVVV YDMPGTTRDS
IYIPMERDGR EYVLIDTAGV RKRGKITDAV EKFSVIKTLQ AIEDANVVML VIDAREGISD
QDLSLLGFIL NSGRSLVIVV NKWDGLSQEV KEQVKETLDF RLGFIDFARV HFISALHGSG
VGNLFESVRE AYDSSTRRVG TSMLTRIMTM AVEDHQPPLV RGRRVKLKYA HAGGYNPPIV
VIHGNQVKDL PDSYKRYLMN YFRKSLDVMG SPIRIQFKEG ENPYANKRNT LTPTQMRKRK
RLMKHIKKNK