Gene EcDH1_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1131 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1214866 
End bp1215756 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX38805 
Protein GI260448383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAC GGCATTTACG CTATTTCGTC GCAGTGGCGC AGGCACTGAA CTTTACCCGT 
GCGGCGGAAA AACTGCATAC CTCACAGCCT TCGTTAAGCA GCCAGATCCG CGATCTTGAA
AACTGTGTCG GTGTTCCGTT ACTGGTGAGG GATAAGCGCA AAGTCGCGTT GACGGCGGCG
GGAGAATGTT TTCTCCAGGA CGCGCTGGCA ATCCTCGAAC AAGCGGAAAA TGCCAAATTA
CGGGCGCGGA AAATTGTTCA GGAAGACAGA CAATTAACCA TTGGCTTTGT GCCATCGGCG
GAAGTGAATT TACTGCCAAA AGTATTACCG ATGTTTCGTC TCAGACAGCC AGACACCTTG
ATTGAGCTGG TGAGTTTAAT CACCACGCAA CAGGAGGAAA AAATTCGCCG TGGTGAACTC
GACGTCGGCT TAATGCGCCA TCCTGTTTAT AGCCCGGAGA TTGATTATCT GGAGCTTTTT
GACGAACCAT TAGTGGTTGT GTTACCGGTT GATCACCCTT TAGCACATGA AAAAGAGATC
ACCGCCGCGC AACTGGATGG CGTGAATTTC GTCAGTACCG ATCCGGTGTA TTCCGGTTCG
CTTGCGCCGA TCGTTAAAGC GTGGTTTGCG CAAGAAAACA GCCAGCCAAA TATCGTCCAG
GTGGCAACGA ATATTCTGGT GACCATGAAT CTGGTGGGCA TGGGGCTGGG CGTCACTTTG
ATACCCGGTT ATATGAATAA TTTTAATACC GGACAGGTTG TTTTTCGTCC CATTGCCGGA
AATGTGCCTT CCATTGCTTT ACTGATGGCG TGGAAGAAAG GGGAGATGAA GCCGGCATTA
CGCGATTTCA TCGCCATTGT GCAGGAACGT TTGGCAAGCG TAACGGCATA A
 
Protein sequence
MELRHLRYFV AVAQALNFTR AAEKLHTSQP SLSSQIRDLE NCVGVPLLVR DKRKVALTAA 
GECFLQDALA ILEQAENAKL RARKIVQEDR QLTIGFVPSA EVNLLPKVLP MFRLRQPDTL
IELVSLITTQ QEEKIRRGEL DVGLMRHPVY SPEIDYLELF DEPLVVVLPV DHPLAHEKEI
TAAQLDGVNF VSTDPVYSGS LAPIVKAWFA QENSQPNIVQ VATNILVTMN LVGMGLGVTL
IPGYMNNFNT GQVVFRPIAG NVPSIALLMA WKKGEMKPAL RDFIAIVQER LASVTA