| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1120 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1204395 |
|---|
| End bp | 1205378 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | ACX38794 |
|---|
| Protein GI | 260448372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAA AAATGAGAAC AACCCGTAAT CTATTATTAA TGGCTACGCT ATTAGGTAGC
GCACTATTTG CCAGGGCTGC GGAAAAAGAA ATGACCATTG GCGCAATATA CCTTGATACT
CAGGGATACT ACGCTGGAGT GCGTCAGGGC GTTCAGGATG CGGCAAAAGA TTCCTCAGTA
CAAGTTCAGT TAATAGAAAC TAACGCCCAG GGTGATATTT CGAAAGAAAG TACCTTTGTT
GATACCCTCG TGGCGCGTAA TGTCGATGCC ATTATTTTAT CGGCAGTGTC TGAAAATGGC
AGTAGCCGTA CCGTTCGTCG CGCCAGTGAA GCGGGCATTC CGGTGATTTG CTACAACACC
TGTATTAATC AAAAGGGGGT CGATAAATAT GTCTCGGCGT ATCTGGTCGG CGATCCGCTG
GAATTTGGTA AAAAACTGGG TAACGCTGCC GCTGATTATT TTATTGCCAA TAAAATTGAC
CAGCCGAAAA TTGCCGTCAT CAATTGCGAA GCCTTTGAAG TTTGTGTGCA GCGACGTAAA
GGATTTGAAG AAGTTTTAAA ATCCCGCGTT CCCGGCGCGC AAATTGTCGC TAATCAGGAA
GGGACTGTTT TAGATAAAGC GATTTCCGTT GGTGAAAAAC TAATTATCTC CACGCCGGAT
CTCAACGCCA TTATGGGGGA ATCGGGCGGT GCGACACTCG GCGCGGTAAA AGCGGTACGT
AATCAAAATC AGGCCGGAAA AATTGCTGTT TTCGGTTCGG ATATGACAAC CGAAATTGCT
CAGGAGCTGG AAAACAATCA GGTGCTGAAA GCGGTAGTGG ATATTTCCGG TAAGAAAATG
GGCAATGCTG TTTTCGCGCA AACATTGAAG GTTATCAATA AACAAGCCGA CGGTGAAAAA
GTGATTCAGG TGCCTATCGA TCTCTATACC AAAACGGAAG ACGGTAAACA GTGGCTGGCA
ACGCACGTTG ATGGTCTGCC CTAA
|
|---|
| Protein sequence | MPTKMRTTRN LLLMATLLGS ALFARAAEKE MTIGAIYLDT QGYYAGVRQG VQDAAKDSSV
QVQLIETNAQ GDISKESTFV DTLVARNVDA IILSAVSENG SSRTVRRASE AGIPVICYNT
CINQKGVDKY VSAYLVGDPL EFGKKLGNAA ADYFIANKID QPKIAVINCE AFEVCVQRRK
GFEEVLKSRV PGAQIVANQE GTVLDKAISV GEKLIISTPD LNAIMGESGG ATLGAVKAVR
NQNQAGKIAV FGSDMTTEIA QELENNQVLK AVVDISGKKM GNAVFAQTLK VINKQADGEK
VIQVPIDLYT KTEDGKQWLA THVDGLP
|
|---|
| |