Gene EcDH1_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1118 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1199706 
End bp1200899 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content51% 
IMG OID 
ProductROK familiy protein 
Protein accessionACX38792 
Protein GI260448370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.869642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCCT GCATTAATAA TCAACAGATT CGCCACCATA ACAAATGCGT GATTCTGGAA 
CTGCTGTACC GGCAAAAGCG CGCCAATAAA TCAACGCTGG CCCGGCTGGC GCAAATTTCG
ATTCCGGCAG TCAGTAATAT TTTGCAGGAA CTGGAAAGCG AAAAACGGGT GGTGAATATT
GACGATGAAA GCCAGACGCG CGGGCATAGT AGCGGTACAT GGCTGATTGC GCCGGAAGGT
GACTGGACGC TGTGCCTGAA CGTGACGCCC ACCAGTATTG AGTGTCAGGT TGCTAATGCT
TGTTTAAGTC CGAAAGGTGA ATTTGAGTAT TTACAGATTG ATGCACCGAC GCCGCAGGCG
CTGCTGTCCG AAATCGAAAA ATGCTGGCAT CGCCACCGTA AATTGTGGCC GGACCATACC
ATCAACCTGG CGTTGGCAAT CCACGGTCAG GTTGATCCTG TGACCGGCGT GTCGCAAACC
ATGCCGCAAG CGCCGTGGAC AACGCCGGTG GAGGTGAAAT ATCTGCTGGA AGAGAAGCTC
GGCATTCGGG TGATGGTCGA TAATGACTGC GTGATGCTGG CGCTGGCGGA GAAATGGCAA
AATAATTCGC AGGAACGGGA TTTCTGCGTG ATCAACGTTG ATTACGGCAT TGGCTCGTCG
TTCGTGATTA ACGAGCAAAT TTATCGCGGC AGTTTGTATG GTAGCGGACA GATTGGTCAC
ACCATCGTTA ATCCGGATGG CGTCGTCTGC GACTGTGGAC GTTATGGCTG CCTGGAAACT
GTCGCCTCGT TAAGCGCATT AAAAAAACAG GCGCGGGTAT GGCTAAAATC ACAACCGGTT
AGTACTCAAC TTGATCCTGA AAAACTGACT ACAGCGCAGT TAATCGCTGC CTGGCAAAGT
GGAGAACCGT GGATCACCAG CTGGGTTGAT CGCTCTGCCA ATGCCATTGG TTTGAGTCTG
TATAACTTCC TCAACATCCT CAATATTAAT CAGATTTGGT TGTACGGTCG CAGTTGTGCC
TTTGGTGAGA ACTGGCTTAA TACTATTATT CGCCAGACAG GATTTAACCC GTTCGACCGC
GACGAAGGAC CGAGCGTGAA AGCGACGCAA ATTGGCTTTG GGCAATTAAG CCGCGCACAA
CAGGTGCTGG GAATTGGCTA TTTGTATGTT GAGGCGCAGT TACGACAGAT TTGA
 
Protein sequence
MRACINNQQI RHHNKCVILE LLYRQKRANK STLARLAQIS IPAVSNILQE LESEKRVVNI 
DDESQTRGHS SGTWLIAPEG DWTLCLNVTP TSIECQVANA CLSPKGEFEY LQIDAPTPQA
LLSEIEKCWH RHRKLWPDHT INLALAIHGQ VDPVTGVSQT MPQAPWTTPV EVKYLLEEKL
GIRVMVDNDC VMLALAEKWQ NNSQERDFCV INVDYGIGSS FVINEQIYRG SLYGSGQIGH
TIVNPDGVVC DCGRYGCLET VASLSALKKQ ARVWLKSQPV STQLDPEKLT TAQLIAAWQS
GEPWITSWVD RSANAIGLSL YNFLNILNIN QIWLYGRSCA FGENWLNTII RQTGFNPFDR
DEGPSVKATQ IGFGQLSRAQ QVLGIGYLYV EAQLRQI