Gene EcDH1_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1101 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1179699 
End bp1180379 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID 
ProductRibonuclease III 
Protein accessionACX38775 
Protein GI260448353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0115033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCA TCGTAATTAA TCGGCTTCAA CGGAAGCTGG GCTACACTTT TAATCATCAG 
GAACTGTTGC AGCAGGCATT AACTCATCGT AGTGCCAGCA GTAAACATAA CGAGCGTTTA
GAATTTTTAG GCGACTCTAT TCTGAGCTAC GTTATCGCCA ATGCGCTTTA TCACCGTTTC
CCTCGTGTGG ATGAAGGCGA TATGAGCCGG ATGCGCGCCA CGCTGGTCCG TGGCAATACG
CTGGCGGAAC TGGCGCGCGA ATTTGAGTTA GGCGAGTGCT TACGTTTAGG GCCAGGTGAA
CTTAAAAGCG GTGGATTTCG TCGTGAGTCA ATTCTCGCCG ACACCGTCGA AGCATTAATT
GGTGGCGTAT TCCTCGACAG TGATATTCAA ACCGTCGAGA AATTAATCCT CAACTGGTAT
CAAACTCGTT TGGACGAAAT TAGCCCAGGC GATAAACAAA AAGATCCGAA AACGCGCTTG
CAAGAATATT TGCAGGGTCG CCATCTGCCG CTGCCGACTT ATCTGGTAGT CCAGGTACGT
GGCGAAGCGC ACGATCAGGA ATTTACTATC CACTGCCAGG TCAGCGGCCT GAGTGAACCG
GTGGTTGGCA CAGGTTCAAG CCGTCGTAAG GCTGAGCAGG CTGCCGCCGA ACAGGCGTTG
AAAAAACTGG AGCTGGAATG A
 
Protein sequence
MNPIVINRLQ RKLGYTFNHQ ELLQQALTHR SASSKHNERL EFLGDSILSY VIANALYHRF 
PRVDEGDMSR MRATLVRGNT LAELAREFEL GECLRLGPGE LKSGGFRRES ILADTVEALI
GGVFLDSDIQ TVEKLILNWY QTRLDEISPG DKQKDPKTRL QEYLQGRHLP LPTYLVVQVR
GEAHDQEFTI HCQVSGLSEP VVGTGSSRRK AEQAAAEQAL KKLELE