Gene EcDH1_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1092 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1169532 
End bp1170866 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content55% 
IMG OID 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionACX38766 
Protein GI260448344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.424436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTAA CGACTTTTTC CGAACTTGAA CTCGACGAAA GCCTGCTGGA AGCCCTCCAG 
GATAAAGGTT TCACTCGCCC GACCGCCATT CAGGCTGCCG CCATTCCGCC TGCGCTCGAT
GGCCGTGATG TACTCGGTTC TGCGCCGACA GGCACCGGTA AAACGGCGGC GTATCTGCTG
CCAGCGTTGC AGCACCTGCT CGATTTCCCG CGTAAGAAAT CCGGTCCGCC GCGTATTTTG
ATCCTCACCC CAACTCGCGA GCTGGCGATG CAGGTGTCCG ATCATGCCCG CGAACTGGCG
AAACATACGC ATCTGGATAT CGCCACCATC ACCGGCGGCG TAGCCTATAT GAACCACGCG
GAAGTGTTCA GCGAAAATCA GGACATCGTG GTCGCCACGA CCGGACGTCT GCTGCAATAC
ATAAAAGAAG AGAACTTCGA TTGCCGCGCG GTTGAAACGC TGATCCTCGA CGAAGCAGAC
CGTATGCTGG ATATGGGCTT CGCTCAGGAT ATCGAACATA TTGCTGGCGA AACGCGCTGG
CGTAAACAGA CCCTGCTCTT TTCGGCAACG CTGGAAGGCG ATGCGATTCA GGACTTTGCC
GAGCGTCTGC TGGAAGATCC GGTGGAAGTT TCTGCCAATC CCTCCACCCG TGAGCGCAAA
AAAATTCATC AGTGGTATTA CCGCGCCGAT GATCTTGAGC ATAAAACCGC GTTGCTGGTG
CATCTGTTAA AACAGCCGGA AGCGACCCGC TCAATTGTGT TTGTGCGTAA GCGTGAGCGT
GTGCATGAGC TGGCAAACTG GCTGCGCGAA GCGGGCATCA ACAACTGCTA TCTCGAAGGT
GAGATGGTAC AGGGCAAGCG TAACGAAGCG ATCAAGCGTT TGACCGAAGG TCGCGTAAAC
GTACTGGTCG CAACCGATGT TGCCGCGCGC GGTATCGACA TTCCTGACGT CAGCCACGTC
TTTAACTTCG ATATGCCGCG CAGTGGCGAT ACTTATTTGC ACCGTATCGG ACGTACCGCG
CGCGCCGGTC GTAAAGGCAC CGCAATTTCG CTGGTGGAAG CCCATGACCA TCTGCTGCTG
GGTAAAGTAG GCCGCTATAT TGAAGAGCCA ATTAAAGCTC GCGTTATTGA TGAGTTACGC
CCGAAAACGC GTGCGCCAAG CGAAAAGCAG ACCGGCAAGC CATCGAAGAA AGTACTGGCT
AAACGTGCTG AGAAGAAAAA AGCTAAAGAG AAAGAGAAGC CGCGGGTGAA AAAACGCCAT
CGCGACACCA AAAATATTGG TAAGCGCCGT AAACCAAGCG GAACGGGCGT GCCACCGCAA
ACGACAGAAG AGTAA
 
Protein sequence
MTVTTFSELE LDESLLEALQ DKGFTRPTAI QAAAIPPALD GRDVLGSAPT GTGKTAAYLL 
PALQHLLDFP RKKSGPPRIL ILTPTRELAM QVSDHARELA KHTHLDIATI TGGVAYMNHA
EVFSENQDIV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IEHIAGETRW
RKQTLLFSAT LEGDAIQDFA ERLLEDPVEV SANPSTRERK KIHQWYYRAD DLEHKTALLV
HLLKQPEATR SIVFVRKRER VHELANWLRE AGINNCYLEG EMVQGKRNEA IKRLTEGRVN
VLVATDVAAR GIDIPDVSHV FNFDMPRSGD TYLHRIGRTA RAGRKGTAIS LVEAHDHLLL
GKVGRYIEEP IKARVIDELR PKTRAPSEKQ TGKPSKKVLA KRAEKKKAKE KEKPRVKKRH
RDTKNIGKRR KPSGTGVPPQ TTEE