| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1090 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1167752 |
|---|
| End bp | 1168339 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | ACX38764 |
|---|
| Protein GI | 260448342 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0625608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACACCGA CCCTTTTAAG TGCTTTTTGG ACTTACACCC TGATTACCGC TATGACGCCA
GGACCGAACA ATATTCTCGC CCTTAGCTCT GCTACGTCGC ATGGATTTCG TCAAAGTACC
CGCGTGCTGG CAGGGATGAG TCTGGGATTT TTGATTGTGA TGTTACTGTG TGCGGGCATT
TCATTTTCAC TGGCAGTGAT TGACCCGGCA GCGGTACACC TTTTGAGTTG GGCGGGGGCG
GCATATATTG TCTGGCTGGC GTGGAAAATC GCCACCAGCC CAACAAAGGA AGACGGACTT
CAGGCAAAAC CAATCAGCTT TTGGGCCAGC TTTGCTTTGC AGTTTGTGAA CGTCAAAATC
ATTTTGTACG GTGTTACGGC ACTGTCGACG TTTGTTCTGC CGCAAACACA GGCGTTAAGC
TGGGTAGTTG GCGTCAGCGT TTTGCTGGCG ATGATTGGGA CGTTTGGCAA TGTGTGCTGG
GCGCTGGCGG GGCATCTGTT TCAGCGATTG TTTCGCCAGT ATGGTCGCCA GTTAAATATC
GTGCTTGCCC TGTTGCTGGT CTATTGCGCG GTACGCATTT TCTATTAA
|
|---|
| Protein sequence | MTPTLLSAFW TYTLITAMTP GPNNILALSS ATSHGFRQST RVLAGMSLGF LIVMLLCAGI
SFSLAVIDPA AVHLLSWAGA AYIVWLAWKI ATSPTKEDGL QAKPISFWAS FALQFVNVKI
ILYGVTALST FVLPQTQALS WVVGVSVLLA MIGTFGNVCW ALAGHLFQRL FRQYGRQLNI
VLALLLVYCA VRIFY
|
|---|
| |