Gene EcDH1_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1088 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1166319 
End bp1167008 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content52% 
IMG OID 
Producturacil-DNA glycosylase 
Protein accessionACX38762 
Protein GI260448340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0467841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACG AATTAACCTG GCATGACGTG CTGGCTGAAG AGAAGCAGCA ACCCTATTTT 
CTTAATACCC TTCAGACCGT CGCCAGCGAG CGGCAGTCCG GCGTCACTAT CTACCCACCA
CAAAAAGATG TCTTTAACGC GTTCCGCTTT ACAGAGTTGG GTGACGTTAA AGTGGTGATT
CTCGGCCAGG ATCCTTATCA CGGACCGGGA CAGGCGCATG GTCTGGCATT TTCCGTTCGT
CCCGGCATTG CCATTCCTCC GTCATTATTG AATATGTATA AAGAGCTGGA AAATACTATT
CCGGGCTTCA CCCGCCCTAA TCATGGTTAT CTTGAAAGCT GGGCGCGTCA GGGCGTTCTG
CTACTCAATA CTGTGTTGAC GGTACGCGCA GGTCAGGCGC ATTCCCACGC CAGCCTCGGC
TGGGAAACCT TCACCGATAA AGTGATCAGC CTGATTAACC AGCATCGCGA AGGCGTGGTG
TTTTTGTTGT GGGGATCGCA TGCGCAAAAG AAAGGGGCGA TTATAGATAA GCAACGCCAT
CATGTACTGA AAGCACCGCA TCCGTCGCCG CTTTCGGCGC ATCGTGGATT CTTTGGCTGC
AACCATTTTG TGCTGGCAAA TCAGTGGCTG GAACAACGTG GCGAGACGCC GATTGACTGG
ATGCCAGTAT TACCGGCAGA GAGTGAGTAA
 
Protein sequence
MANELTWHDV LAEEKQQPYF LNTLQTVASE RQSGVTIYPP QKDVFNAFRF TELGDVKVVI 
LGQDPYHGPG QAHGLAFSVR PGIAIPPSLL NMYKELENTI PGFTRPNHGY LESWARQGVL
LLNTVLTVRA GQAHSHASLG WETFTDKVIS LINQHREGVV FLLWGSHAQK KGAIIDKQRH
HVLKAPHPSP LSAHRGFFGC NHFVLANQWL EQRGETPIDW MPVLPAESE