| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1087 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1165234 |
|---|
| End bp | 1166271 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | ACX38761 |
|---|
| Protein GI | 260448339 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0787829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATG AAATGAAAGG TAAAAGCGGC AAGGTCAAAG TGATGTATGT CCGCAGTGAT
GATGATTCTG ATAAACGTAC CCACAACCCG CGTACCGGGA AAGGGGGCGG GCGTCCAGGA
AAATCTCGTG CTGACGGTGG CCGTCGCCCC GCCCGCGATG ACAAACAGAG TCAGCCCCGT
GACCGCAAGT GGGAAGATTC GCCGTGGCGC ACGGTTTCCC GCGCGCCGGG TGATGAGACG
CCGGAAAAGG CCGATCACGG TGGCATCAGT GGTAAAAGTT TTATTGATCC GGAAGTGTTG
CGTCGTCAGC GTGCGGAAGA AACCCGCGTC TACGGCGAAA ATGCATGTCA GGCACTTTTC
CAGAGCCGTC CGGAAGCGAT TGTTCGCGCC TGGTTTATCC AGAGTGTAAC GCCGCGTTTT
AAAGAAGCTT TGCGCTGGAT GGCAGCAAAC CGCAAAGCGT ACCATGTGGT GGATGAAGCG
GAATTGACAA AAGCGTCAGG CACGGAACAT CACGGCGGCG TTTGCTTCTT GATCAAAAAG
CGTAACGGTA CAACCGTGCA GCAGTGGGTA AGCCAGGCAG GCGCGCAGGA TTGCGTTCTG
GCACTGGAAA ACGAATCTAA CCCGCATAAC CTGGGTGGCA TGATGCGCAG CTGCGCGCAC
TTCGGCGTGA AAGGTGTCGT GGTGCAGGAT GCGGCACTGC TGGAGTCGGG GGCGGCTATC
CGTACCGCAG AAGGCGGCGC AGAGCACGTT CAGCCGATTA CTGGCGACAA CATTGTTAAC
GTGCTGGATG ATTTCCGTCA GGCAGGTTAC ACCGTAGTGA CCACTTCCAG CGAGCAGGGT
AAACCGCTGT TCAAAACTAG TCTGCCAGCG AAAATGGTAC TGGTGCTGGG TCAGGAATAT
GAAGGGTTAC CGGATGCCGC ACGCGATCCG AACGATCTGC GCGTGAAGAT TGACGGTACG
GGCAACGTTG CCGGGCTGAA TATCTCTGTC GCAACCGGCG TTTTGCTTGG TGAATGGTGG
CGTCAGAATA AAGCCTGA
|
|---|
| Protein sequence | MNDEMKGKSG KVKVMYVRSD DDSDKRTHNP RTGKGGGRPG KSRADGGRRP ARDDKQSQPR
DRKWEDSPWR TVSRAPGDET PEKADHGGIS GKSFIDPEVL RRQRAEETRV YGENACQALF
QSRPEAIVRA WFIQSVTPRF KEALRWMAAN RKAYHVVDEA ELTKASGTEH HGGVCFLIKK
RNGTTVQQWV SQAGAQDCVL ALENESNPHN LGGMMRSCAH FGVKGVVVQD AALLESGAAI
RTAEGGAEHV QPITGDNIVN VLDDFRQAGY TVVTTSSEQG KPLFKTSLPA KMVLVLGQEY
EGLPDAARDP NDLRVKIDGT GNVAGLNISV ATGVLLGEWW RQNKA
|
|---|
| |