Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1020 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 1088109 |
End bp | 1089509 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | GABA permease |
Protein accession | ACX38701 |
Protein GI | 260448279 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCAAT CATCGCAACC ACATGAGTTA GGCGGCGGGC TGAAGTCACG CCACGTCACC ATGTTGTCTA TTGCCGGTGT TATCGGCGCA AGTCTGTTTG TCGGTTCCAG CGTCGCCATC GCCGAAGCGG GCCCGGCGGT ATTACTGGCC TATCTGTTCG CCGGGCTACT GGTGGTTATG ATTATGCGGA TGTTGGCGGA AATGGCGGTT GCCACGCCCG ATACCGGTTC GTTTTCCACC TATGCCGATA AAGCCATTGG TCGCTGGGCG GGCTATACCA TCGGCTGGTT GTACTGGTGG TTTTGGGTAC TGGTTATCCC GCTGGAAGCC AACATCGCCG CCATGATCCT GCACTCATGG GTTCCAGGCA TTCCCATCTG GTTATTTTCC CTCGTCATTA CCCTCGCCTT AACTGGCAGT AACTTATTAA GCGTTAAAAA CTACGGCGAA TTTGAGTTCT GGCTGGCGCT GTGCAAAGTC ATCGCTATCC TGGCCTTTAT TTTCCTTGGT GCAGTCGCAA TTAGCGGTTT TTACCCGTAT GCCGAAGTGA GCGGGATCTC AAGATTGTGG GATAGCGGCG GCTTTATGCC CAACGGTTTC GGTGCGGTAT TAAGCGCGAT GTTGATCACC ATGTTCTCGT TTATGGGCGC AGAAATTGTC ACCATTGCCG CCGCGGAATC CGACACGCCG GAAAAACATA TTGTCCGCGC CACCAACTCG GTTATCTGGC GTATTTCTAT CTTCTATTTA TGTTCTATTT TTGTCGTCGT GGCATTAATT CCGTGGAATA TGCCCGGACT AAAAGCCGTC GGTTCTTATC GCTCGGTACT GGAATTGCTC AATATTCCCC ATGCGAAATT AATCATGGAC TGCGTGATAT TACTTTCCGT AACCAGTTGC CTGAACTCGG CGCTGTATAC CGCGTCAAGG ATGCTCTACT CCTTAAGTCG TCGCGGTGAT GCTCCCGCGG TAATGGGTAA AATCAACCGC AGTAAAACCC CGTACGTGGC GGTGTTACTC TCCACCGGCG CGGCATTCTT AACGGTGGTG GTGAACTATT ACGCGCCTGC GAAGGTATTT AAATTTCTGA TCGACAGCTC CGGCGCTATC GCCCTGCTGG TTTATTTAGT CATCGCCGTT TCACAGTTGC GGATGCGCAA AATTCTGCGA GCAGAAGGAA GCGAAATTCG CTTGCGAATG TGGCTTTATC CGTGGCTCAC CTGGCTAGTC ATCGGCTTTA TTACCTTTGT GTTGGTAGTG ATGCTATTCC GTCCGGCGCA ACAGTTAGAA GTGATCTCCA CCGGCTTATT AGCGATAGGG ATTATCTGTA CCGTGCCAAT TATGGCTCGC TGGAAAAAGC TGGTATTGTG GCAAAAAACA CCCGTTCATA ATACGCGCTG A
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Protein sequence | MGQSSQPHEL GGGLKSRHVT MLSIAGVIGA SLFVGSSVAI AEAGPAVLLA YLFAGLLVVM IMRMLAEMAV ATPDTGSFST YADKAIGRWA GYTIGWLYWW FWVLVIPLEA NIAAMILHSW VPGIPIWLFS LVITLALTGS NLLSVKNYGE FEFWLALCKV IAILAFIFLG AVAISGFYPY AEVSGISRLW DSGGFMPNGF GAVLSAMLIT MFSFMGAEIV TIAAAESDTP EKHIVRATNS VIWRISIFYL CSIFVVVALI PWNMPGLKAV GSYRSVLELL NIPHAKLIMD CVILLSVTSC LNSALYTASR MLYSLSRRGD APAVMGKINR SKTPYVAVLL STGAAFLTVV VNYYAPAKVF KFLIDSSGAI ALLVYLVIAV SQLRMRKILR AEGSEIRLRM WLYPWLTWLV IGFITFVLVV MLFRPAQQLE VISTGLLAIG IICTVPIMAR WKKLVLWQKT PVHNTR
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