| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1019 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1087426 |
|---|
| End bp | 1088088 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | ACX38700 |
|---|
| Protein GI | 260448278 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTA CGTCTCTGGA TGGCTATCGC TGGCTGAAGA ACGATATTAT TCGCGGTAAT
TTTCAACCGG ATGAAAAATT ACGAATGAGT TTGCTGACAT CGCGTTATGC ACTTGGCGTT
GGGCCGTTAC GGGAAGCTCT TTCGCAACTG GTGGCGGAAC GGCTGGTCAC GGTGGTGAAT
CAAAAAGGGT ATCGGGTGGC GTCTATGTCA GAGCAGGAGC TGCTCGATAT TTTCGACGCC
CGCGCCAATA TGGAAGCGAT GTTAGTGAGT CTGGCGATTG CCCGCGGTGG CGATGAGTGG
GAGGCAGACG TTCTCGCAAA AGCGCATCTG CTGAGTAAGC TTGAGGCCTG TGACGCCAGC
GAGAAAATGC TTGATGAGTG GGATCTGCGT CATCAGGCGT TTCATACGGC AATTGTGGCG
GGCTGTGGTT CTCACTATTT GCTGCAAATG CGTGAACGGT TGTTTGATCT GGCGGCGCGT
TATCGATTTA TCTGGCTGCG GCGAACGGTG CTTTCGGTGG AAATGCTGGA GGATAAACAC
GATCAGCACC AGACCCTGAC TGCGGCGGTA CTGGCGCGAG ATACCGCGCG CGCCAGTGAG
TTAATGCGCC AGCATTTACT GACGCCAATT CCCATTATCC AGCAGGCGAT GGCTGGCAAT
TAA
|
|---|
| Protein sequence | MTITSLDGYR WLKNDIIRGN FQPDEKLRMS LLTSRYALGV GPLREALSQL VAERLVTVVN
QKGYRVASMS EQELLDIFDA RANMEAMLVS LAIARGGDEW EADVLAKAHL LSKLEACDAS
EKMLDEWDLR HQAFHTAIVA GCGSHYLLQM RERLFDLAAR YRFIWLRRTV LSVEMLEDKH
DQHQTLTAAV LARDTARASE LMRQHLLTPI PIIQQAMAGN
|
|---|
| |