| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1004 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1075638 |
|---|
| End bp | 1076630 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | ACX38685 |
|---|
| Protein GI | 260448263 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACATA GCGTACTTTT TGCGACAGCG TTTGCCACGC TTATCTCTAC ACAAACTTTT
GCTGCCGATC TGCCGGGCAA AGGCATTACT GTTAATCCAG TTCAGAGCAC CATCACTGAA
GAAACCTTCC AGACGCTGCT GGTCAGTCGT GCGCTGGAGA AATTAGGTTA TACCGTCAAC
AAACCCAGCG AAGTAGATTA CAACGTTGGC TACACCTCGC TTGCTTCCGG CGATGCAACC
TTCACCGCCG TGAACTGGAC GCCACTGCAT GACAACATGT ACGAAGCTGC CGGTGGCGAT
AAGAAATTTT ATCGTGAAGG GGTATTTGTT AACGGCGCGG CACAGGGTTA CCTGATCGAT
AAGAAAACCG CCGACCAGTA CAAAATCACC AACATCGCAC AACTGAAAGA TCCGAAGATC
GCCAAACTGT TCGATACCAA CGGCGACGGA AAAGCGGATT TAACCGGTTG TAACCCTGGC
TGGGGCTGCG AAGGTGCGAT CAACCACCAG CTTGCCGCGT ATGAACTGAC CAACACCGTG
ACGCATAATC AGGGGAACTA CGCAGCGATG ATGGCCGACA CCATCAGTCG CTACAAAGAG
GGCAAACCGG TGTTTTATTA CACCTGGACG CCGTACTGGG TGAGTAACGA ACTGAAGCCG
GGCAAAGATG TCGTCTGGTT GCAGGTGCCG TTCTCCGCAC TGCCGGGCGA TAAAAACGCC
GATACCAAAC TGCCGAATGG TGCGAATTAT GGCTTCCCGG TCAGCACCAT GCATATCGTT
GCCAACAAAG CCTGGGCCGA GAAAAACCCG GCAGCAGCGA AACTGTTTGC CATTATGCAG
TTGCCAGTGG CAGATATTAA CGCCCAGAAC GCCATTATGC ATGACGGCAA AGCCTCAGAA
GGCGATATTC AGGGACACGT TGATGGTTGG ATCAAAGCCC ACCAGCAGCA GTTCGATGGC
TGGGTGAATG AGGCGCTGGC AGCGCAGAAG TAA
|
|---|
| Protein sequence | MRHSVLFATA FATLISTQTF AADLPGKGIT VNPVQSTITE ETFQTLLVSR ALEKLGYTVN
KPSEVDYNVG YTSLASGDAT FTAVNWTPLH DNMYEAAGGD KKFYREGVFV NGAAQGYLID
KKTADQYKIT NIAQLKDPKI AKLFDTNGDG KADLTGCNPG WGCEGAINHQ LAAYELTNTV
THNQGNYAAM MADTISRYKE GKPVFYYTWT PYWVSNELKP GKDVVWLQVP FSALPGDKNA
DTKLPNGANY GFPVSTMHIV ANKAWAEKNP AAAKLFAIMQ LPVADINAQN AIMHDGKASE
GDIQGHVDGW IKAHQQQFDG WVNEALAAQK
|
|---|
| |