Gene EcDH1_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0933 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1003991 
End bp1004908 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content51% 
IMG OID 
ProductCRISPR-associated protein Cas1 
Protein accessionACX38616 
Protein GI260448194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGGC TTCCCCTTAA TCCCATTCCA CTCAAAGATC GCGTCTCCAT GATCTTTCTG 
CAATATGGGC AGATCGATGT AATAGATGGC GCGTTTGTAC TTATCGACAA GACAGGGATC
CGCACTCATA TTCCTGTTGG CTCGGTTGCC TGCATCATGC TGGAACCTGG TACACGGGTT
TCGCATGCAG CTGTACGCCT GGCTGCGCAA GTTGGAACAT TGTTGGTATG GGTGGGGGAA
GCGGGCGTTC GTGTTTATGC TTCTGGTCAG CCTGGAGGTG CGCGTTCAGA TAAGCTGCTC
TATCAGGCAA AACTTGCTCT GGATGAAGAT TTGCGTCTGA AGGTCGTACG TAAAATGTTT
GAACTTCGGT TTGGAGAACC TGCGCCTGCC CGGCGCTCCG TAGAGCAACT CAGAGGTATA
GAAGGCAGTC GCGTGCGGGC AACCTACGCA CTTCTGGCGA AGCAATACGG CGTGACATGG
AATGGACGTC GCTACGATCC GAAAGACTGG GAAAAGGGCG ATACGATCAA CCAATGCATT
AGCGCTGCAA CTTCCTGTTT ATACGGCGTA ACTGAAGCGG CGATACTTGC AGCTGGTTAT
GCACCAGCTA TTGGGTTTGT GCATACAGGA AAGCCTCTTT CCTTTGTTTA CGATATTGCA
GACATCATTA AATTTGACAC TGTTGTACCG AAAGCTTTTG AGATAGCGCG TCGTAACCCT
GGTGAGCCGG ACCGGGAAGT CCGTTTGGCG TGCAGGGATA TTTTTCGCAG TAGTAAAACA
TTAGCCAAAT TGATTCCGCT TATAGAGGAC GTGCTTGCCG CTGGAGAAAT ACAACCGCCG
GCCCCACCTG AAGATGCACA GCCTGTTGCC ATTCCGCTTC CTGTTTCACT GGGAGATGCA
GGCCATCGGA GTAGCTGA
 
Protein sequence
MTWLPLNPIP LKDRVSMIFL QYGQIDVIDG AFVLIDKTGI RTHIPVGSVA CIMLEPGTRV 
SHAAVRLAAQ VGTLLVWVGE AGVRVYASGQ PGGARSDKLL YQAKLALDED LRLKVVRKMF
ELRFGEPAPA RRSVEQLRGI EGSRVRATYA LLAKQYGVTW NGRRYDPKDW EKGDTINQCI
SAATSCLYGV TEAAILAAGY APAIGFVHTG KPLSFVYDIA DIIKFDTVVP KAFEIARRNP
GEPDREVRLA CRDIFRSSKT LAKLIPLIED VLAAGEIQPP APPEDAQPVA IPLPVSLGDA
GHRSS