Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0933 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1003991 |
End bp | 1004908 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | CRISPR-associated protein Cas1 |
Protein accession | ACX38616 |
Protein GI | 260448194 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCTGGC TTCCCCTTAA TCCCATTCCA CTCAAAGATC GCGTCTCCAT GATCTTTCTG CAATATGGGC AGATCGATGT AATAGATGGC GCGTTTGTAC TTATCGACAA GACAGGGATC CGCACTCATA TTCCTGTTGG CTCGGTTGCC TGCATCATGC TGGAACCTGG TACACGGGTT TCGCATGCAG CTGTACGCCT GGCTGCGCAA GTTGGAACAT TGTTGGTATG GGTGGGGGAA GCGGGCGTTC GTGTTTATGC TTCTGGTCAG CCTGGAGGTG CGCGTTCAGA TAAGCTGCTC TATCAGGCAA AACTTGCTCT GGATGAAGAT TTGCGTCTGA AGGTCGTACG TAAAATGTTT GAACTTCGGT TTGGAGAACC TGCGCCTGCC CGGCGCTCCG TAGAGCAACT CAGAGGTATA GAAGGCAGTC GCGTGCGGGC AACCTACGCA CTTCTGGCGA AGCAATACGG CGTGACATGG AATGGACGTC GCTACGATCC GAAAGACTGG GAAAAGGGCG ATACGATCAA CCAATGCATT AGCGCTGCAA CTTCCTGTTT ATACGGCGTA ACTGAAGCGG CGATACTTGC AGCTGGTTAT GCACCAGCTA TTGGGTTTGT GCATACAGGA AAGCCTCTTT CCTTTGTTTA CGATATTGCA GACATCATTA AATTTGACAC TGTTGTACCG AAAGCTTTTG AGATAGCGCG TCGTAACCCT GGTGAGCCGG ACCGGGAAGT CCGTTTGGCG TGCAGGGATA TTTTTCGCAG TAGTAAAACA TTAGCCAAAT TGATTCCGCT TATAGAGGAC GTGCTTGCCG CTGGAGAAAT ACAACCGCCG GCCCCACCTG AAGATGCACA GCCTGTTGCC ATTCCGCTTC CTGTTTCACT GGGAGATGCA GGCCATCGGA GTAGCTGA
|
Protein sequence | MTWLPLNPIP LKDRVSMIFL QYGQIDVIDG AFVLIDKTGI RTHIPVGSVA CIMLEPGTRV SHAAVRLAAQ VGTLLVWVGE AGVRVYASGQ PGGARSDKLL YQAKLALDED LRLKVVRKMF ELRFGEPAPA RRSVEQLRGI EGSRVRATYA LLAKQYGVTW NGRRYDPKDW EKGDTINQCI SAATSCLYGV TEAAILAAGY APAIGFVHTG KPLSFVYDIA DIIKFDTVVP KAFEIARRNP GEPDREVRLA CRDIFRSSKT LAKLIPLIED VLAAGEIQPP APPEDAQPVA IPLPVSLGDA GHRSS
|
| |