| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0931 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1002715 |
|---|
| End bp | 1003389 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | CRISPR-associated protein Cas5 family |
|---|
| Protein accession | ACX38614 |
|---|
| Protein GI | 260448192 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCTT ATTTGATCTT GCGGCTTGCT GGGCCAATGC AAGCCTGGGG GCAGCCGACC
TTTGAAGGAA CGCGACCTAC CGGAAGATTT CCGACCCGAA GCGGGTTATT AGGGCTACTC
GGGGCTTGTC TTGGGATCCA ACGTGATGAT ACTTCTTCAT TACAGGCGTT ATCAGAGAGT
GTGCAATTTG CAGTGCGCTG CGATGAACTC ATTCTTGACG ATCGTCGTGT GTCTGTAACG
GGGTTGCGTG ATTACCATAC AGTCCTTGGA GCGCGAGAAG ATTACCGTGG TTTGAAAAGT
CATGAAACGA TTCAAACATG GCGCGAATAT TTATGTGATG CCTCCTTTAC CGTCGCTCTC
TGGTTAACAC CCCATGCAAC GATGGTTATC TCAGAACTTG AAAAAGCAGT ATTAAAGCCT
CGGTATACAC CTTACCTGGG GCGGAGAAGT TGCCCACTAA CACACCCGCT TTTTTTGGGG
ACATGTCAGG CATCGGATCC TCAGAAGGCG CTATTAAATT ATGAGCCCGT TGGCGGCGAT
ATATATAGTG AGGAATCAGT TACAGGGCAT CATTTAAAAT TTACGGCGCG CGACGAACCG
ATGATCACCT TGCCTCGACA ATTTGCTTCC CGAGAATGGT ATGTGATTAA AGGAGGTATG
GATGTATCTC AGTAA
|
|---|
| Protein sequence | MRSYLILRLA GPMQAWGQPT FEGTRPTGRF PTRSGLLGLL GACLGIQRDD TSSLQALSES
VQFAVRCDEL ILDDRRVSVT GLRDYHTVLG AREDYRGLKS HETIQTWREY LCDASFTVAL
WLTPHATMVI SELEKAVLKP RYTPYLGRRS CPLTHPLFLG TCQASDPQKA LLNYEPVGGD
IYSEESVTGH HLKFTARDEP MITLPRQFAS REWYVIKGGM DVSQ
|
|---|
| |