Gene EcDH1_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0901 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp964378 
End bp965718 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content53% 
IMG OID 
Productglucarate dehydratase 
Protein accessionACX38584 
Protein GI260448162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCTC AATTTACGAC GCCTGTTGTT ACTGAAATGC AGGTTATCCC GGTGGCGGGT 
CATGACAGTA TGCTGATGAA TCTGAGTGGT GCACACGCAC CGTTCTTTAC GCGTAATATT
GTGATTATCA AAGATAATTC TGGTCACACT GGCGTAGGGG AAATTCCCGG CGGCGAGAAA
ATCCGTAAAA CGCTGGAAGA TGCGATTCCG CTGGTGGTAG GTAAAACGCT GGGTGAATAC
AAAAACGTTC TGACGCTGGT GCGTAATACT TTTGCCGATC GTGATGCTGG TGGGCGCGGT
TTGCAGACAT TTGACCTACG TACCACTATT CATGTAGTTA CCGGGATAGA AGCGGCAATG
CTGGATCTGC TGGGGCAGCA TCTGGGGGTA AACGTGGCAT CGCTGCTGGG CGATGGTCAA
CAGCGTAGCG AAGTCGAAAT GCTCGGTTAT CTGTTCTTCG TCGGTAATCG CAAAGCCACG
CCGCTGCCGT ATCAAAGCCA GCCGGATGAC TCATGCGACT GGTATCGCCT GCGTCATGAA
GAAGCGATGA CGCCGGATGC GGTGGTGCGC CTGGCGGAAG CGGCATATGA AAAATATGGC
TTCAACGATT TCAAACTGAA GGGCGGTGTA CTGGCCGGGG AAGAAGAGGC CGAGTCTATT
GTGGCACTGG CGCAACGCTT CCCGCAGGCG CGTATTACGC TCGATCCTAA CGGTGCCTGG
TCGCTGAACG AAGCGATTAA AATCGGTAAA TACCTGAAAG GTTCGCTGGC TTATGCAGAA
GATCCGTGTG GTGCGGAGCA AGGTTTCTCC GGGCGTGAAG TGATGGCAGA GTTCCGTCGC
GCGACAGGTC TACCGACTGC AACCAATATG ATCGCCACCG ACTGGCGGCA AATGGGCCAT
ACGCTCTCCC TGCAATCCGT TGATATCCCG CTGGCGGATC CGCATTTCTG GACAATGCAA
GGTTCGGTAC GTGTGGCGCA AATGTGCCAT GAATTTGGCC TGACCTGGGG TTCACACTCT
AACAACCACT TCGATATTTC CCTGGCGATG TTTACCCATG TTGCCGCCGC TGCACCGGGT
AAAATTACTG CTATTGATAC GCACTGGATT TGGCAGGAAG GCAATCAGCG CCTGACCAAA
GAACCGTTTG AGATCAAAGG CGGGCTGGTA CAGGTGCCAG AAAAACCGGG GCTGGGTGTA
GAAATCGATA TGGATCAAGT GATGAAAGCC CATGAGCTGT ATCAGAAACA CGGGCTTGGC
GCGCGTGACG ATGCGATGGG AATGCAGTAT CTGATTCCTG GCTGGACGTT CGATAACAAG
CGCCCGTGCA TGGTGCGTTA A
 
Protein sequence
MSSQFTTPVV TEMQVIPVAG HDSMLMNLSG AHAPFFTRNI VIIKDNSGHT GVGEIPGGEK 
IRKTLEDAIP LVVGKTLGEY KNVLTLVRNT FADRDAGGRG LQTFDLRTTI HVVTGIEAAM
LDLLGQHLGV NVASLLGDGQ QRSEVEMLGY LFFVGNRKAT PLPYQSQPDD SCDWYRLRHE
EAMTPDAVVR LAEAAYEKYG FNDFKLKGGV LAGEEEAESI VALAQRFPQA RITLDPNGAW
SLNEAIKIGK YLKGSLAYAE DPCGAEQGFS GREVMAEFRR ATGLPTATNM IATDWRQMGH
TLSLQSVDIP LADPHFWTMQ GSVRVAQMCH EFGLTWGSHS NNHFDISLAM FTHVAAAAPG
KITAIDTHWI WQEGNQRLTK EPFEIKGGLV QVPEKPGLGV EIDMDQVMKA HELYQKHGLG
ARDDAMGMQY LIPGWTFDNK RPCMVR