Gene EcDH1_0871 details

Gene Information

• Locus tag: EcDH1_0871
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 927760
• End bp: 931302
• Gene Length: 3543 bp
• Protein Length: 1180 aa
• Translation table: 11
• GC content: 55%
• Product: exodeoxyribonuclease V, beta subunit
• Protein accession: ACX38554
• Protein GI: 260448132

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATG TCGCCGAGAC ACTAGATCCT TTGCGCTTGC CCTTACAGGG TGAGCGCCTG 
ATTGAAGCCT CTGCCGGCAC AGGCAAAACC TTTACGATTG CGGCGCTCTA TTTGCGCCTG 
TTACTTGGAC TAGGCGGTTC CGCCGCCTTT CCCCGCCCGC TGACCGTTGA AGAACTGCTG 
GTGGTCACCT TTACCGAGGC TGCCACGGCA GAATTGCGCG GTCGTATCCG TAGCAATATC 
CACGAGTTGC GCATCGCCTG TCTGCGTGAA ACCACCGACA ATCCACTGTA CGAACGCCTG 
CTGGAAGAGA TCGACGATAA AGCGCAAGCC GCGCAGTGGT TGTTGTTAGC CGAACGGCAG 
ATGGATGAAG CGGCAGTCTT TACTATTCAC GGCTTTTGCC AGCGCATGCT CAACCTGAAT 
GCCTTTGAAT CCGGCATGCT GTTTGAGCAG CAGCTGATTG AAGATGAGTC TCTGCTACGC 
TACCAGGCCT GCGCCGATTT CTGGCGTCGC CACTGCTACC CGCTGCCGCG TGAAATAGCC 
CAGGTCGTCT TTGAAACCTG GAAAGGGCCG CAGGCGTTGC TGCGCGATAT TAATCGTTAT 
CTGCAAGGCG AAGCGCCGGT TATCAAAGCA CCGCCGCCCG ATGATGAAAC GCTGGCTTCC 
CGTCACGCGC AAATTGTGGC GCGTATTGAT ACGGTAAAAC AGCAGTGGCG CGACGCAGTG 
GGTGAACTGG ATGCGCTGAT CGAATCTTCT GGTATTGATC GACGCAAGTT TAACCGTAGC 
AATCAGGCTA AATGGATCGA CAAGATCAGC GCCTGGGCAG AAGAAGAGAC AAACAGTTAT 
CAGTTGCCGG AGTCGCTGGA AAAATTCTCC CAGCGTTTCT TAGAAGATCG CACGAAGGCC 
GGGGGGGAAA CCCCGCGACA TCCACTGTTT GAGGCGATCG ATCAACTGCT TGCAGAACCA 
TTGTCGATCC GCGATCTGGT GATCACCCGC GCATTGGCTG AGATCCGCGA AACAGTAGCG 
CGTGAAAAAC GCCGCCGTGG CGAATTGGGT TTTGATGACA TGTTAAGTCG GCTCGATTCC 
GCGCTGCGTA GCGAAAGCGG TGAGGTGTTG GCAGCGGCGA TCCGTACGCG ATTCCCGGTG 
GCAATGATCG ATGAATTTCA GGATACCGAC CCCCAGCAGT ACCGAATTTT TCGCCGTATC 
TGGCACCATC AGCCGGAAAC CGCATTGTTG CTAATTGGCG ACCCGAAGCA GGCCATATAT 
GCATTCCGGG GTGCGGATAT CTTCACTTAT ATGAAGGCGC GTAGCGAAGT TCACGCCCAC 
TACACTTTAG ACACCAACTG GCGTTCCGCA CCAGGAATGG TGAACAGCGT GAATAAGCTT 
TTCAGCCAGA CTGATGACGC GTTCATGTTT CGCGAAATAC CGTTTATTCC AGTGAAATCA 
GCCGGGAAAA ATCAGGCGTT ACGTTTTGTA TTTAAAGGTG AAACACAGCC TGCGATGAAA 
ATGTGGCTGA TGGAAGGCGA AAGCTGCGGC GTTGGCGATT ATCAAAGTAC CATGGCGCAG 
GTATGTGCTG CGCAAATCCG CGACTGGCTA CAAGCCGGAC AGCGGGGCGA AGCGTTGCTG 
ATGAACGGCG ACGACGCGCG TCCGGTGCGT GCTTCGGACA TCAGTGTGCT GGTGCGCAGC 
CGCCAGGAGG CCGCCCAGGT GCGCGATGCC TTAACGTTGC TGGAAATCCC TTCCGTTTAC 
CTTTCGAACC GCGACAGTGT TTTTGAAACT CTGGAAGCGC AGGAAATGCT TTGGTTGTTG 
CAGGCGGTGA TGACGCCCGA ACGTGAGAAC ACCCTGCGTA GTGCGCTGGC AACGTCAATG 
ATGGGGCTGA ACGCGCTGGA TATCGAAACG CTGAACAATG ACGAACATGC GTGGGATGTG 
GTAGTCGAAG AGTTCGATGG TTATCGGCAA ATCTGGCGCA AACGTGGCGT TATGCCGATG 
CTGCGGGCGC TGATGTCGGC GCGTAACATT GCTGAAAACT TGCTGGCAAC GGCAGGCGGT 
GAGCGGCGTC TTACCGATAT CTTGCATATC AGCGAACTGC TACAAGAAGC CGGAACGCAG 
CTGGAAAGTG AACATGCGCT GGTACGCTGG TTATCGCAAC ATATCCTCGA GCCAGACAGT 
AATGCCTCCA GCCAACAAAT GCGTCTCGAA AGTGATAAAC ATCTGGTGCA GATTGTCACG 
ATCCACAAAT CGAAAGGGCT GGAATATCCA TTGGTCTGGC TGCCGTTTAT CACCAATTTC 
CGCGTCCAGG AGCAGGCGTT TTATCACGAT CGCCACTCGT TTGAGGCAGT TCTGGATCTT 
AATGCTGCGC CAGAAAGCGT CGACCTCGCG GAGGCCGAAC GTCTGGCGGA AGATCTGCGT 
TTGCTTTACG TGGCGCTGAC ACGTTCGGTT TGGCATTGCA GTCTCGGCGT TGCACCGCTG 
GTGCGCCGTC GTGGCGATAA AAAAGGTGAC ACCGACGTCC ACCAAAGTGC GCTCGGGCGT 
TTGCTGCAAA AAGGGGAACC GCAAGATGCG GCAGGGCTTC GCACCTGTAT TGAAGCGTTA 
TGCGATGATG ATATTGCCTG GCAAACGGCA CAAACTGGTG ATAACCAACC CTGGCAGGTT 
AATGATGTTT CTACAGCAGA GCTGAATGCG AAGACGTTAC AACGATTGCC CGGCGATAAC 
TGGCGCGTCA CCAGCTACTC TGGTTTGCAA CAGCGTGGTC ACGGTATCGC CCAGGATTTG 
ATGCCTCGGC TGGATGTCGA TGCTGCAGGC GTTGCCAGCG TCGTTGAAGA ACCGACGTTA 
ACACCACATC AGTTTCCGCG CGGTGCGTCA CCGGGGACGT TCTTGCACAG TTTGTTTGAA 
GACCTGGATT TTACCCAGCC GGTTGACCCG AACTGGGTGC GGGAAAAACT GGAACTCGGC 
GGCTTTGAAT CGCAGTGGGA ACCGGTATTG ACCGAGTGGA TCACGGCTGT CCTCCAGGCA 
CCTCTCAATG AAACCGGCGT AAGCCTGAGT CAACTTTCCG CCCGCAATAA ACAGGTGGAG 
ATGGAGTTTT ATCTGCCGAT TAGTGAACCG CTTATCGCCA GTCAGCTTGA TACGTTAATC 
CGCCAGTTTG ACCCGCTATC CGCAGGCTGC CCGCCGCTGG AGTTCATGCA GGTACGTGGC 
ATGTTAAAAG GCTTTATCGA CCTGGTGTTC CGCCACGAAG GGCGTTATTA CCTGCTCGAC 
TATAAATCCA ACTGGTTGGG TGAAGACAGT TCGGCTTACA CCCAACAGGC TATGGCAGCG 
GCAATGCAGG CACACCGCTA TGATCTGCAA TATCAGCTTT ATACCCTGGC GCTGCATCGT 
TATCTGCGCC ATCGCATTGC TGATTACGAC TATGAGCACC ACTTTGGCGG CGTTATTTAT 
CTGTTCCTGC GTGGCGTTGA TAAAGAACAT CCGCAACAGG GGATTTACAC AACCCGACCC 
AACGCCGGGT TGATTGCCCT GATGGATGAG ATGTTTGCCG GTATGACCCT GGAGGAGGCG 
TAA 

 

Protein sequence

MSDVAETLDP LRLPLQGERL IEASAGTGKT FTIAALYLRL LLGLGGSAAF PRPLTVEELL 
VVTFTEAATA ELRGRIRSNI HELRIACLRE TTDNPLYERL LEEIDDKAQA AQWLLLAERQ 
MDEAAVFTIH GFCQRMLNLN AFESGMLFEQ QLIEDESLLR YQACADFWRR HCYPLPREIA 
QVVFETWKGP QALLRDINRY LQGEAPVIKA PPPDDETLAS RHAQIVARID TVKQQWRDAV 
GELDALIESS GIDRRKFNRS NQAKWIDKIS AWAEEETNSY QLPESLEKFS QRFLEDRTKA 
GGETPRHPLF EAIDQLLAEP LSIRDLVITR ALAEIRETVA REKRRRGELG FDDMLSRLDS 
ALRSESGEVL AAAIRTRFPV AMIDEFQDTD PQQYRIFRRI WHHQPETALL LIGDPKQAIY 
AFRGADIFTY MKARSEVHAH YTLDTNWRSA PGMVNSVNKL FSQTDDAFMF REIPFIPVKS 
AGKNQALRFV FKGETQPAMK MWLMEGESCG VGDYQSTMAQ VCAAQIRDWL QAGQRGEALL 
MNGDDARPVR ASDISVLVRS RQEAAQVRDA LTLLEIPSVY LSNRDSVFET LEAQEMLWLL 
QAVMTPEREN TLRSALATSM MGLNALDIET LNNDEHAWDV VVEEFDGYRQ IWRKRGVMPM 
LRALMSARNI AENLLATAGG ERRLTDILHI SELLQEAGTQ LESEHALVRW LSQHILEPDS 
NASSQQMRLE SDKHLVQIVT IHKSKGLEYP LVWLPFITNF RVQEQAFYHD RHSFEAVLDL 
NAAPESVDLA EAERLAEDLR LLYVALTRSV WHCSLGVAPL VRRRGDKKGD TDVHQSALGR 
LLQKGEPQDA AGLRTCIEAL CDDDIAWQTA QTGDNQPWQV NDVSTAELNA KTLQRLPGDN 
WRVTSYSGLQ QRGHGIAQDL MPRLDVDAAG VASVVEEPTL TPHQFPRGAS PGTFLHSLFE 
DLDFTQPVDP NWVREKLELG GFESQWEPVL TEWITAVLQA PLNETGVSLS QLSARNKQVE 
MEFYLPISEP LIASQLDTLI RQFDPLSAGC PPLEFMQVRG MLKGFIDLVF RHEGRYYLLD 
YKSNWLGEDS SAYTQQAMAA AMQAHRYDLQ YQLYTLALHR YLRHRIADYD YEHHFGGVIY 
LFLRGVDKEH PQQGIYTTRP NAGLIALMDE MFAGMTLEEA