| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0870 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 924879 |
|---|
| End bp | 927767 |
|---|
| Gene Length | 2889 bp |
|---|
| Protein Length | 962 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | ACX38553 |
|---|
| Protein GI | 260448131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCA GCACCTGGTT CAAAGCATTA TTGTTGTTAG TTGCCCTTTG GGCACCCTTA
AGTCAGGCAG AAACGGGATG GCAGCCGATT CAGGAAACCA TCCGTAAAAG TGATAAAGAT
AACCGCCAGT ATCAGGCTAT ACGTCTGGAT AACGGTATGG TGGTCTTGCT GGTTTCTGAT
CCGCAGGCAG TTAAATCGCT CTCGGCGCTG GTGGTGCCCG TTGGGTCGCT GGAAGATCCC
GAGGCGTACC AGGGGCTGGC ACATTACCTT GAACATATGA GTCTGATGGG GTCGAAAAAG
TACCCGCAGG CTGACAGTCT GGCCGAATAT CTCAAAATGC ACGGCGGTAG TCACAATGCC
AGCACTGCGC CGTATCGCAC GGCTTTCTAT CTGGAAGTTG AGAACGACGC CTTGCCTGGT
GCGGTAGACC GCCTGGCCGA TGCTATTGCT GAACCTTTGC TCGACAAGAA ATATGCCGAA
CGTGAGCGTA ATGCGGTGAA CGCTGAATTA ACCATGGCGC GTACGCGTGA CGGGATGCGC
ATGGCACAGG TCAGCGCAGA AACCATTAAC CCGGCACACC CCGGTTCAAA GTTTTCTGGT
GGTAACCTCG AAACTTTAAG CGACAAACCT GGTAATCCGG TGCAGCAGGC GCTGAAAGAT
TTCCACGAGA AGTACTATTC CGCCAATTTG ATGAAGGCGG TTATTTACAG TAATAAACCG
CTGCCGGAGT TGGCAAAAAT GGCGGCGGAC ACCTTTGGTC GCGTGCCGAA CAAAGAGAGC
AAAAAACCGG AAATCACCGT GCCGGTAGTC ACCGACGCGC AAAAGGGCAT TATCATTCAT
TACGTCCCTG CGCTGCCGCG TAAAGTGTTG CGCGTTGAGT TTCGCATCGA TAACAACTCA
GCGAAGTTCC GTAGTAAAAC CGATGAATTG ATTACCTATC TGATTGGCAA TCGCAGCCCA
GGTACACTTT CTGACTGGCT GCAAAAGCAG GGATTAGTTG AGGGCATTAG CGCCAACTCC
GATCCTATCG TCAACGGCAA CAGCGGCGTA TTAGCGATCT CTGCGTCTTT AACCGATAAA
GGCCTGGCTA ATCGCGATCA GGTTGTGGCG GCAATTTTTA GCTATCTCAA TCTGTTACGT
GAAAAAGGCA TTGATAAACA ATACTTCGAT GAACTGGCGA ATGTGCTGGA TATCGACTTC
CGTTATCCGT CGATCACCCG TGATATGGAT TACGTCGAAT GGCTGGCAGA TACCATGATT
CGCGTTCCTG TTGAGCATAC GCTGGATGCA GTCAATATTG CCGATCGGTA CGATGCTAAA
GCAGTAAAGG AACGTCTGGC GATGATGACG CCGCAGAATG CGCGTATCTG GTATATCAGC
CCGAAAGAGC CGCACAACAA AACGGCTTAC TTTGTCGATG CGCCGTATCA GGTCGATAAA
ATCAGCGCAC AAACTTTCGC CGACTGGCAG AAAAAAGCCG CCGACATTGC GCTCTCTTTG
CCAGAGCTTA ACCCTTATAT TCCTGATGAT TTCTCGCTGA TTAAGTCAGA GAAGAAATAC
GACCATCCAG AGCTGATTGT TGATGAGTCG AATCTGCGCG TGGTGTATGC GCCAAGCCGT
TATTTTGCCA GCGAGCCCAA AGCTGATGTC AGCCTGATTT TGCGTAATCC GAAAGCCATG
GACAGCGCCC GCAATCAGGT GATGTTTGCG CTCAATGATT ATCTCGCAGG GCTGGCGCTT
GATCAGTTAA GCAACCAGGC GTCGGTTGGT GGCATAAGTT TTTCCACCAA CGCTAACAAC
GGCCTTATGG TTAATGCTAA TGGTTACACC CAGCGTCTGC CGCAGCTGTT CCAGGCATTG
CTCGAGGGGT ACTTTAGCTA TACCGCTACG GAAGATCAGC TTGAGCAGGC GAAGTCCTGG
TATAACCAGA TGATGGATTC CGCAGAAAAG GGTAAAGCGT TTGAGCAGGC GATTATGCCC
GCGCAGATGC TCTCGCAAGT GCCGTACTTC TCGCGAGATG AACGGCGTAA AATTTTGCCC
TCCATTACGT TGAAAGAGGT GCTGGCCTAT CGCGACGCCT TAAAATCAGG GGCTCGACCA
GAGTTTATGG TTATCGGCAA CATGACCGAG GCCCAGGCAA CAACGCTGGC ACGCGATGTG
CAAAAACAGT TGGGCGCTGA TGGTTCAGAG TGGTGTCGAA ACAAAGATGT AGTGGTCGAT
AAAAAACAAT CCGTCATCTT TGAAAAAGCC GGTAACAGCA CCGACTCCGC ACTGGCAGCG
GTATTTGTAC CGACTGGCTA CGATGAATAC ACCAGCTCAG CCTATAGCTC TCTGTTGGGG
CAGATCGTAC AGCCGTGGTT CTACAATCAG TTGCGTACCG AAGAACAATT GGGCTATGCC
GTGTTTGCGT TTCCAATGAG CGTGGGGCGT CAGTGGGGCA TGGGCTTCCT TTTGCAAAGC
AATGATAAAC AGCCTTCATT CTTGTGGGAG CGTTACAAGG CGTTTTTCCC AACCGCAGAG
GCAAAATTGC GAGCGATGAA GCCAGATGAG TTTGCGCAAA TCCAGCAGGC GGTAATTACC
CAGATGCTGC AGGCACCGCA AACGCTCGGC GAAGAAGCAT CGAAGTTAAG TAAAGATTTC
GATCGCGGCA ATATGCGCTT CGATTCGCGT GATAAAATCG TGGCCCAGAT AAAACTGCTG
ACGCCGCAAA AACTTGCTGA TTTCTTCCAT CAGGCGGTGG TCGAGCCGCA AGGCATGGCT
ATTCTGTCGC AGATTTCCGG CAGCCAGAAC GGGAAAGCCG AATATGTACA CCCTGAAGGC
TGGAAAGTGT GGGAGAACGT CAGCGCGTTG CAGCAAACAA TGCCCCTGAT GAGTGAAAAG
AATGAGTGA
|
|---|
| Protein sequence | MPRSTWFKAL LLLVALWAPL SQAETGWQPI QETIRKSDKD NRQYQAIRLD NGMVVLLVSD
PQAVKSLSAL VVPVGSLEDP EAYQGLAHYL EHMSLMGSKK YPQADSLAEY LKMHGGSHNA
STAPYRTAFY LEVENDALPG AVDRLADAIA EPLLDKKYAE RERNAVNAEL TMARTRDGMR
MAQVSAETIN PAHPGSKFSG GNLETLSDKP GNPVQQALKD FHEKYYSANL MKAVIYSNKP
LPELAKMAAD TFGRVPNKES KKPEITVPVV TDAQKGIIIH YVPALPRKVL RVEFRIDNNS
AKFRSKTDEL ITYLIGNRSP GTLSDWLQKQ GLVEGISANS DPIVNGNSGV LAISASLTDK
GLANRDQVVA AIFSYLNLLR EKGIDKQYFD ELANVLDIDF RYPSITRDMD YVEWLADTMI
RVPVEHTLDA VNIADRYDAK AVKERLAMMT PQNARIWYIS PKEPHNKTAY FVDAPYQVDK
ISAQTFADWQ KKAADIALSL PELNPYIPDD FSLIKSEKKY DHPELIVDES NLRVVYAPSR
YFASEPKADV SLILRNPKAM DSARNQVMFA LNDYLAGLAL DQLSNQASVG GISFSTNANN
GLMVNANGYT QRLPQLFQAL LEGYFSYTAT EDQLEQAKSW YNQMMDSAEK GKAFEQAIMP
AQMLSQVPYF SRDERRKILP SITLKEVLAY RDALKSGARP EFMVIGNMTE AQATTLARDV
QKQLGADGSE WCRNKDVVVD KKQSVIFEKA GNSTDSALAA VFVPTGYDEY TSSAYSSLLG
QIVQPWFYNQ LRTEEQLGYA VFAFPMSVGR QWGMGFLLQS NDKQPSFLWE RYKAFFPTAE
AKLRAMKPDE FAQIQQAVIT QMLQAPQTLG EEASKLSKDF DRGNMRFDSR DKIVAQIKLL
TPQKLADFFH QAVVEPQGMA ILSQISGSQN GKAEYVHPEG WKVWENVSAL QQTMPLMSEK
NE
|
|---|
| |