Gene EcDH1_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0842 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp894452 
End bp895261 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content40% 
IMG OID 
Producttranscriptional regulator, CadC 
Protein accessionACX38525 
Protein GI260448103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTGGA TTATTAACGA TAATATCGAG TTCTGGCCTG AGCACCGAAA ATTAATATCG 
GTACATAACG CCGATCTTAA CGTCGTTCTG ACAACGCCAG CCAGTCGATG TTTATCACTT
CTACTTGAAG CTTTTCCTGA TGTGGTTGCA CAACAAGATT TTTTCACCAG AGTCTGGGAA
GAAGAAGGTA TGCGTGTGCC TACTAACACG TTATATCAGA ACATATCCAT TATCAGACGC
GGATTTCGCG CTGTTGGTGA TACTACCCAC TCGCTAATTG CAACCGTGCC GAGAAGAGGA
TTCAAGATCC ATAATGACAT TAACATACAA AATCATGTAA TAAACTCGTC AACAGACGCA
CATACACACA ATGCCCCACC TGCCATAAAA GTTAATGCGG GATACAAAGA GAGCATTGGT
GGCGCAAAGA ATTTCAATAA CAAAATCCTC AAACATATAA AAAGTCATCT AATTATGTTG
AGCGCATTTG TCATAGGCGC ATATTCTGCA TATTGGCTAT GGAATAATAA TCAACCGAAG
CCATTTTTCA AGGATTACAA GACTGTTGCG GAAATTAATG GCTGCCATTT TAATGTAACA
GAAGATACAA TTGATGGGTT GAAAGAGTTC GATAAATATA AAACACGGAT ACTGGATTCG
GGGATTAACT GTAAAAAACA TCCGTGGTTA TACTTCCCTC TTGCAAAATC CTCACCGGGG
ATGATTGTTA TGGCATGCAA TAAAAACTAT AACCAACATG AAGTGGCAAA CTGTTTAACC
CTGTCTTACC GTGAGGTTAA TCGTGATTGA
 
Protein sequence
MYWIINDNIE FWPEHRKLIS VHNADLNVVL TTPASRCLSL LLEAFPDVVA QQDFFTRVWE 
EEGMRVPTNT LYQNISIIRR GFRAVGDTTH SLIATVPRRG FKIHNDINIQ NHVINSSTDA
HTHNAPPAIK VNAGYKESIG GAKNFNNKIL KHIKSHLIML SAFVIGAYSA YWLWNNNQPK
PFFKDYKTVA EINGCHFNVT EDTIDGLKEF DKYKTRILDS GINCKKHPWL YFPLAKSSPG
MIVMACNKNY NQHEVANCLT LSYREVNRD