Gene EcDH1_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0836 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp890293 
End bp891669 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content35% 
IMG OID 
Producttranscriptional regulator, CadC 
Protein accessionACX38519 
Protein GI260448097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTAG AAAATAAATT CTCATATCAT TTTCTTGAGG GATTAACGCT CACGGAAGAT 
GGAATTCTTA CTCAAGGAAA TGAGCAAGTT TATATTCCAC AGAAAGAGTT AGGTGTATTA
ATAGTATTAC TTGAATCCGC TGGTCATGTT GTACTGAAAG ATATGATCAT CGAATCAGTA
TGGAAAAATA TTATTGTTAG TGACGAGTCC CTGACAAGAT GTATCTATTC TTTGCGCTGC
ATTTTTGAAA AAATTGGCTA TGATCGTTGC ATAGAAACAA TCTACCGGAA AGGTTATCGT
TTCAGCGGGC AGGTTTTCAA AACTAAAATT AATGAAGATA ATACTTCAGA CTATTCCATA
GCTATATTCC CTTTCACTAC TTCATTGAAT ACACTGGATC CATTAATACT TAATCAGGAA
TTAGTGCAAA TCATTTCAAA TAAAAAAATC GATGGTCTCT ATACCTATCC GATGGCTGCG
ACAAATTTTT GTAATGATCA CATATCTCAA AATTCATTCT TGAGCAGATT CAAGCCAGAT
TATTTCGTTA CAGGAAGAAT AAACCAGAAT AATGCAGTGA ACACTTTATA CATTGAGTTG
ATCGACGCTA AAAACCTTTT CCTCATCGCC AGTAATCATC TCCCTGTTGA TGAACTACAT
AATACATCAC AATTTATTAT AGATAATATC CTTCAAACGG TACATAAACC AGAACGATCT
GTAAGATTAG CTAAGCAGGA CCAAGGATAT AAGAATCATT ATTTATCAGA TGAAATGTTA
GCCGGAAAGA AAGAACTTTA CGACTTCACC CCTGAAAGCA TTTACAGGGC CATGACTATA
TTTGATAGAT TACAAAATAA AAGTGATATA CAGACGCTAA AAACAGAATG TTATTGCCTT
CTAGCGGAAT GCCATATGTC TTTGGCACTT CATGGAAAAA GTGAACTTGA ACTTGCTGCT
CAAAAAGCAT TAGAGCTTTT AGATTATGTA TCAGACATAA CCACTGTCGA TGGAAAAATT
TTAGCTATTA TGGGACTGAT AACTGGTCTG TCTGGACAAG CAAAAGTATC TCATATCTTA
TTTGAACAGG CTAAGATACA CTCAACTGAT ATAGCCTCTC TCTACTACTA TAGGGCACTA
GTCCACTTTC ATAATGAAAA AATTGAAGAG GCAAGGATTT GTATAGACAA ATCACTACAA
CTCGAACCCA GAAGACGAAA AGCAGTTGTG ATAAAAGAAT GTGTAGATAT GTATGTGCCT
AACCCGCTCA AAAACAACAT TAAACTCTAC TATAAAGAAA CTGAGAGTGA AAGCCATCGA
GTTATAATTG ACAACATTTT GAAATTAAAG CAGCTGACGA GAATTTGTAT GCGATAA
 
Protein sequence
MDLENKFSYH FLEGLTLTED GILTQGNEQV YIPQKELGVL IVLLESAGHV VLKDMIIESV 
WKNIIVSDES LTRCIYSLRC IFEKIGYDRC IETIYRKGYR FSGQVFKTKI NEDNTSDYSI
AIFPFTTSLN TLDPLILNQE LVQIISNKKI DGLYTYPMAA TNFCNDHISQ NSFLSRFKPD
YFVTGRINQN NAVNTLYIEL IDAKNLFLIA SNHLPVDELH NTSQFIIDNI LQTVHKPERS
VRLAKQDQGY KNHYLSDEML AGKKELYDFT PESIYRAMTI FDRLQNKSDI QTLKTECYCL
LAECHMSLAL HGKSELELAA QKALELLDYV SDITTVDGKI LAIMGLITGL SGQAKVSHIL
FEQAKIHSTD IASLYYYRAL VHFHNEKIEE ARICIDKSLQ LEPRRRKAVV IKECVDMYVP
NPLKNNIKLY YKETESESHR VIIDNILKLK QLTRICMR