Gene EcDH1_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0820 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp873788 
End bp874999 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content51% 
IMG OID 
ProductM20/DapE family protein YgeY 
Protein accessionACX38504 
Protein GI260448082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGA ATATTCCATT CAAACTGATT CTTGAAAAAG CAAAAGATTA CCAGGCGGAT 
ATGACTCGCT TCCTGCGCGA CATGGTTGCT ATTCCCAGTG AAAGCTGCGA CGAGAAACGC
GTAGTACATC GTATTAAAGA AGAGATGGAA AAAGTCGGCT TCGATAAAGT TGAAATCGAC
CCGATGGGCA ACGTTCTCGG TTATATCGGC CACGGCCCGC GTCTGGTGGC AATGGACGCT
CATATCGATA CCGTCGGCAT TGGCAACATC AAAAACTGGG ACTTCGATCC GTACGAAGGC
ATGGAAACTG ATGAACTGAT TGGTGGTCGC GGTACTTCCG ACCAGGAAGG TGGCATGGCC
TCTATGGTTT ATGCCGGTAA AATCATTAAA GACCTCGGTC TGGAAGATGA ATATACCCTG
CTGGTTACCG GTACGGTGCA GGAAGAAGAC TGCGACGGTC TGTGCTGGCA GTACATTATT
GAACAATCCG GCATTCGCCC GGAATTTGTG GTCAGTACCG AACCAACCGA CTGCCAGGTA
TACCGTGGTC AGCGCGGTCG TATGGAAATT CGTATTGATG TTCAGGGTGT TAGCTGCCAC
GGTTCTGCAC CAGAACGCGG TGATAACGCC ATTTTCAAAA TGGGTCCGAT TCTTGGCGAA
TTACAAGAAC TCTCCCAACG TCTGGGTTAT GACGAATTCC TCGGCAAAGG CACCCTCACC
GTTTCTGAAA TCTTCTTCAC ATCCCCAAGC CGTTGCGCTG TAGCAGACAG CTGCGCAGTT
TCAATCGACC GTCGTCTGAC CTGGGGCGAA ACCTGGGAAG GCGCGCTGGA CGAAATCCGC
GCCCTGCCTG CAGTACAGAA AGCTAACGCG GTTGTTTCTA TGTACAACTA CGACCGTCCG
TCCTGGACTG GCCTGGTTTA CCCAACCGAA TGCTACTTCC CGACCTGGAA AGTGGAAGAA
GATCACTTCA CCGTTAAAGC ACTGGTGAAT GCCTACGAAG GGCTGTTTGG CAAAGCGCCG
GTTGTTGATA AGTGGACCTT CTCAACTAAC GGCGTATCTA TCATGGGCCG TCACGGCATT
CCGGTGATCG GCTTTGGCCC GGGTAAAGAA CCTGAAGCGC ATGCACCTAA CGAAAAAACC
TGGAAATCTC ACCTGGTGAC CTGTGCCGCG ATGTACGCTG CAATCCCGTT AAGCTGGCTG
GCAACAGAGT AA
 
Protein sequence
MAKNIPFKLI LEKAKDYQAD MTRFLRDMVA IPSESCDEKR VVHRIKEEME KVGFDKVEID 
PMGNVLGYIG HGPRLVAMDA HIDTVGIGNI KNWDFDPYEG METDELIGGR GTSDQEGGMA
SMVYAGKIIK DLGLEDEYTL LVTGTVQEED CDGLCWQYII EQSGIRPEFV VSTEPTDCQV
YRGQRGRMEI RIDVQGVSCH GSAPERGDNA IFKMGPILGE LQELSQRLGY DEFLGKGTLT
VSEIFFTSPS RCAVADSCAV SIDRRLTWGE TWEGALDEIR ALPAVQKANA VVSMYNYDRP
SWTGLVYPTE CYFPTWKVEE DHFTVKALVN AYEGLFGKAP VVDKWTFSTN GVSIMGRHGI
PVIGFGPGKE PEAHAPNEKT WKSHLVTCAA MYAAIPLSWL ATE