Gene EcDH1_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0802 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp848589 
End bp850106 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content53% 
IMG OID 
Productlysyl-tRNA synthetase 
Protein accessionACX38486 
Protein GI260448064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000973431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC AACACGCACA GGGCGCTGAC GCGGTAGTCG ATCTTAACAA TGAACTGAAA 
ACGCGTCGTG AGAAGCTGGC GAACCTGCGC GAGCAGGGGA TTGCCTTCCC GAACGATTTC
CGTCGCGATC ATACCTCTGA CCAATTGCAC GCAGAATTCG ACGGCAAAGA GAACGAAGAA
CTGGAAGCGC TGAACATCGA AGTCGCCGTT GCTGGCCGCA TGATGACCCG TCGTATTATG
GGTAAAGCGT CTTTCGTTAC CCTGCAGGAC GTTGGCGGTC GCATTCAGCT GTACGTTGCC
CGTGACGATC TCCCGGAAGG CGTTTATAAC GAGCAGTTCA AAAAATGGGA CCTCGGCGAC
ATCCTCGGCG CGAAAGGTAA GCTGTTCAAA ACCAAAACCG GCGAACTGTC TATCCACTGC
ACCGAGTTGC GTCTGCTGAC CAAAGCACTG CGTCCGCTGC CGGATAAATT CCACGGCTTG
CAGGATCAGG AAGCGCGCTA TCGTCAGCGT TATCTCGATC TCATCTCCAA CGATGAATCC
CGCAACACCT TTAAAGTGCG CTCGCAGATC CTCTCTGGTA TTCGCCAGTT CATGGTGAAC
CGCGGCTTTA TGGAAGTTGA AACGCCGATG ATGCAGGTGA TCCCTGGCGG TGCCGCTGCG
CGTCCGTTTA TCACCCACCA TAACGCGCTG GATCTCGACA TGTACCTGCG TATCGCGCCG
GAACTGTACC TCAAGCGTCT GGTGGTTGGT GGCTTCGAGC GTGTATTCGA AATCAACCGT
AACTTCCGTA ACGAAGGTAT TTCCGTACGT CATAACCCAG AGTTCACCAT GATGGAACTC
TACATGGCTT ACGCAGATTA CAAAGATCTG ATCGAGCTGA CCGAATCGCT GTTCCGTACT
CTGGCACAGG ATATTCTCGG TAAGACGGAA GTGACCTACG GCGACGTGAC GCTGGACTTC
GGTAAACCGT TCGAAAAACT GACCATGCGT GAAGCGATCA AGAAATATCG CCCGGAAACC
GACATGGCGG ATCTGGACAA CTTCGACTCT GCGAAAGCAA TTGCTGAATC TATCGGCATC
CACGTTGAGA AGAGCTGGGG TCTGGGCCGT ATCGTTACCG AGATCTTCGA AGAAGTGGCA
GAAGCACATC TGATTCAGCC GACCTTCATT ACTGAATATC CGGCAGAAGT TTCTCCGCTG
GCGCGTCGTA ACGACGTTAA CCCGGAAATC ACAGACCGCT TTGAGTTCTT CATTGGTGGT
CGTGAAATCG GTAACGGCTT TAGCGAGCTG AATGACGCGG AAGATCAGGC GCAACGCTTC
CTGGATCAGG TTGCCGCGAA AGACGCAGGT GACGACGAAG CGATGTTCTA CGATGAAGAT
TACGTCACCG CACTGGAACA TGGCTTACCG CCGACAGCAG GTCTGGGAAT TGGTATCGAC
CGTATGGTAA TGCTGTTCAC CAACAGCCAT ACCATCCGCG ACGTTATTCT GTTCCCGGCG
ATGCGTCCGG TAAAATAA
 
Protein sequence
MSEQHAQGAD AVVDLNNELK TRREKLANLR EQGIAFPNDF RRDHTSDQLH AEFDGKENEE 
LEALNIEVAV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDDLPEGVYN EQFKKWDLGD
ILGAKGKLFK TKTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEARYRQR YLDLISNDES
RNTFKVRSQI LSGIRQFMVN RGFMEVETPM MQVIPGGAAA RPFITHHNAL DLDMYLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYKDL IELTESLFRT
LAQDILGKTE VTYGDVTLDF GKPFEKLTMR EAIKKYRPET DMADLDNFDS AKAIAESIGI
HVEKSWGLGR IVTEIFEEVA EAHLIQPTFI TEYPAEVSPL ARRNDVNPEI TDRFEFFIGG
REIGNGFSEL NDAEDQAQRF LDQVAAKDAG DDEAMFYDED YVTALEHGLP PTAGLGIGID
RMVMLFTNSH TIRDVILFPA MRPVK