Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0802 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 848589 |
End bp | 850106 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | lysyl-tRNA synthetase |
Protein accession | ACX38486 |
Protein GI | 260448064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000973431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAC AACACGCACA GGGCGCTGAC GCGGTAGTCG ATCTTAACAA TGAACTGAAA ACGCGTCGTG AGAAGCTGGC GAACCTGCGC GAGCAGGGGA TTGCCTTCCC GAACGATTTC CGTCGCGATC ATACCTCTGA CCAATTGCAC GCAGAATTCG ACGGCAAAGA GAACGAAGAA CTGGAAGCGC TGAACATCGA AGTCGCCGTT GCTGGCCGCA TGATGACCCG TCGTATTATG GGTAAAGCGT CTTTCGTTAC CCTGCAGGAC GTTGGCGGTC GCATTCAGCT GTACGTTGCC CGTGACGATC TCCCGGAAGG CGTTTATAAC GAGCAGTTCA AAAAATGGGA CCTCGGCGAC ATCCTCGGCG CGAAAGGTAA GCTGTTCAAA ACCAAAACCG GCGAACTGTC TATCCACTGC ACCGAGTTGC GTCTGCTGAC CAAAGCACTG CGTCCGCTGC CGGATAAATT CCACGGCTTG CAGGATCAGG AAGCGCGCTA TCGTCAGCGT TATCTCGATC TCATCTCCAA CGATGAATCC CGCAACACCT TTAAAGTGCG CTCGCAGATC CTCTCTGGTA TTCGCCAGTT CATGGTGAAC CGCGGCTTTA TGGAAGTTGA AACGCCGATG ATGCAGGTGA TCCCTGGCGG TGCCGCTGCG CGTCCGTTTA TCACCCACCA TAACGCGCTG GATCTCGACA TGTACCTGCG TATCGCGCCG GAACTGTACC TCAAGCGTCT GGTGGTTGGT GGCTTCGAGC GTGTATTCGA AATCAACCGT AACTTCCGTA ACGAAGGTAT TTCCGTACGT CATAACCCAG AGTTCACCAT GATGGAACTC TACATGGCTT ACGCAGATTA CAAAGATCTG ATCGAGCTGA CCGAATCGCT GTTCCGTACT CTGGCACAGG ATATTCTCGG TAAGACGGAA GTGACCTACG GCGACGTGAC GCTGGACTTC GGTAAACCGT TCGAAAAACT GACCATGCGT GAAGCGATCA AGAAATATCG CCCGGAAACC GACATGGCGG ATCTGGACAA CTTCGACTCT GCGAAAGCAA TTGCTGAATC TATCGGCATC CACGTTGAGA AGAGCTGGGG TCTGGGCCGT ATCGTTACCG AGATCTTCGA AGAAGTGGCA GAAGCACATC TGATTCAGCC GACCTTCATT ACTGAATATC CGGCAGAAGT TTCTCCGCTG GCGCGTCGTA ACGACGTTAA CCCGGAAATC ACAGACCGCT TTGAGTTCTT CATTGGTGGT CGTGAAATCG GTAACGGCTT TAGCGAGCTG AATGACGCGG AAGATCAGGC GCAACGCTTC CTGGATCAGG TTGCCGCGAA AGACGCAGGT GACGACGAAG CGATGTTCTA CGATGAAGAT TACGTCACCG CACTGGAACA TGGCTTACCG CCGACAGCAG GTCTGGGAAT TGGTATCGAC CGTATGGTAA TGCTGTTCAC CAACAGCCAT ACCATCCGCG ACGTTATTCT GTTCCCGGCG ATGCGTCCGG TAAAATAA
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Protein sequence | MSEQHAQGAD AVVDLNNELK TRREKLANLR EQGIAFPNDF RRDHTSDQLH AEFDGKENEE LEALNIEVAV AGRMMTRRIM GKASFVTLQD VGGRIQLYVA RDDLPEGVYN EQFKKWDLGD ILGAKGKLFK TKTGELSIHC TELRLLTKAL RPLPDKFHGL QDQEARYRQR YLDLISNDES RNTFKVRSQI LSGIRQFMVN RGFMEVETPM MQVIPGGAAA RPFITHHNAL DLDMYLRIAP ELYLKRLVVG GFERVFEINR NFRNEGISVR HNPEFTMMEL YMAYADYKDL IELTESLFRT LAQDILGKTE VTYGDVTLDF GKPFEKLTMR EAIKKYRPET DMADLDNFDS AKAIAESIGI HVEKSWGLGR IVTEIFEEVA EAHLIQPTFI TEYPAEVSPL ARRNDVNPEI TDRFEFFIGG REIGNGFSEL NDAEDQAQRF LDQVAAKDAG DDEAMFYDED YVTALEHGLP PTAGLGIGID RMVMLFTNSH TIRDVILFPA MRPVK
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