| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0791 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 838662 |
|---|
| End bp | 840095 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 1 |
|---|
| Protein accession | ACX38475 |
|---|
| Protein GI | 260448053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAC TCACCTTACC GAAAGATTTC TTATGGGGCG GCGCAGTTGC CGCTCATCAG
GTCGAAGGCG GCTGGAACAA AGGCGGAAAA GGGCCGAGCA TTTGTGACGT TCTGACCGGT
GGCGCACACG GCGTGCCGCG CGAAATCACC AAAGAAGTCT TGCCAGGAAA ATACTATCCA
AACCATGAAG CCGTTGATTT TTATGGTCAC TATAAGGAAG ACATCAAGCT ATTTGCCGAA
ATGGGCTTCA AATGTTTTCG TACATCCATT GCCTGGACGC GCATTTTTCC AAAAGGCGAT
GAAGCTCAGC CAAACGAAGA AGGGCTGAAG TTCTACGATG ATATGTTCGA TGAACTGCTG
AAATACAACA TCGAACCGGT GATCACCCTC TCCCACTTTG AAATGCCGCT GCATCTGGTG
CAGCAATACG GTAGCTGGAC CAACCGTAAA GTGGTTGATT TCTTTGTACG TTTCGCGGAA
GTGGTATTTG AACGCTATAA GCACAAAGTC AAATACTGGA TGACCTTCAA CGAAATTAAC
AACCAGCGTA ACTGGCGTGC ACCGCTGTTC GGTTACTGCT GCTCCGGCGT GGTGTATACC
GAGCATGAAA ACCCGGAAGA GACGATGTAT CAGGTGCTGC ATCACCAGTT TGTCGCCAGC
GCCCTGGCGG TGAAAGCTGC GCGTCGCATT AACCCGGAGA TGAAAGTCGG CTGTATGCTG
GCGATGGTGC CGCTCTATCC TTACTCCTGT AACCCGGACG ATGTGATGTT CGCTCAGGAG
TCGATGCGCG AACGCTACGT CTTTACCGAT GTGCAGCTAC GCGGCTATTA CCCGTCCTAT
GTGTTGAACG AGTGGGAGCG TCGCGGATTT AACATCAAAA TGGAAGACGG CGATCTGGAT
GTGCTGCGTG AAGGCACCTG CGATTATCTT GGTTTCAGCT ATTACATGAC CAATGCAGTG
AAGGCCGAAG GCGGCACCGG CGATGCGATC TCTGGTTTTG AAGGCAGCGT ACCAAACCCG
TATGTTAAAG CATCTGACTG GGGCTGGCAG ATTGATCCAG TAGGTCTGCG CTATGCACTT
TGCGAACTGT ATGAGCGTTA TCAGAGGCCG CTGTTTATTG TCGAAAACGG TTTTGGCGCT
TACGACAAAG TGGAAGAAGA TGGCAGCATC AACGACGACT ACCGCATTGA CTACCTGCGC
GCCCATATCG AAGAGATGAA AAAAGCGGTG ACTTACGATG GCGTGGATCT GATGGGCTAC
ACACCGTGGG GCTGCATCGA CTGCGTGTCG TTCACCACCG GGCAGTACAG CAAACGCTAC
GGCTTTATCT ATGTGAATAA ACATGACGAC GGTACTGGCG ATATGTCGCG TTCACGTAAG
AAGAGCTTTA ACTGGTACAA AGAGGTGATT GCCAGCAACG GCGAGAAGCT TTAA
|
|---|
| Protein sequence | MKKLTLPKDF LWGGAVAAHQ VEGGWNKGGK GPSICDVLTG GAHGVPREIT KEVLPGKYYP
NHEAVDFYGH YKEDIKLFAE MGFKCFRTSI AWTRIFPKGD EAQPNEEGLK FYDDMFDELL
KYNIEPVITL SHFEMPLHLV QQYGSWTNRK VVDFFVRFAE VVFERYKHKV KYWMTFNEIN
NQRNWRAPLF GYCCSGVVYT EHENPEETMY QVLHHQFVAS ALAVKAARRI NPEMKVGCML
AMVPLYPYSC NPDDVMFAQE SMRERYVFTD VQLRGYYPSY VLNEWERRGF NIKMEDGDLD
VLREGTCDYL GFSYYMTNAV KAEGGTGDAI SGFEGSVPNP YVKASDWGWQ IDPVGLRYAL
CELYERYQRP LFIVENGFGA YDKVEEDGSI NDDYRIDYLR AHIEEMKKAV TYDGVDLMGY
TPWGCIDCVS FTTGQYSKRY GFIYVNKHDD GTGDMSRSRK KSFNWYKEVI ASNGEKL
|
|---|
| |