Gene EcDH1_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0717 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp755742 
End bp757241 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content57% 
IMG OID 
Productglycolate oxidase, subunit GlcD 
Protein accessionACX38401 
Protein GI260447979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCT TGTACGAAGA GCGTCTTGAT GGCGCTTTAC TCGATGTCGA CCGCACATCG 
GTACTGATGG CACTGCGTGA GCATGTCCCT GGACTTGAGA TCCTGCATAC CGATGAGGAG
ATCATTCCTT ACGAGTGTGA CGGGTTGAGC GCGTATCGCA CGCGTCCATT ACTGGTTGTT
CTGCCTAAGC AAATGGAACA GGTGACAGCG ATTCTGGCTG TCTGCCATCG CCTGCGTGTA
CCGGTGGTGA CCCGTGGTGC AGGCACCGGG CTTTCTGGTG GCGCGCTGCC GCTGGAAAAA
GGTGTGTTGT TGGTGATGGC GCGCTTTAAA GAGATCCTCG ACATTAACCC CGTTGGTCGC
CGCGCGCGCG TGCAGCCAGG CGTGCGTAAC CTGGCGATCT CCCAGGCCGT TGCACCGCAT
AATCTCTACT ACGCACCGGA CCCTTCCTCA CAAATCGCCT GTTCCATTGG CGGCAATGTG
GCTGAAAATG CCGGCGGCGT CCACTGCCTG AAATATGGTC TGACCGTACA TAACCTGCTG
AAAATTGAAG TGCAAACGCT GGACGGCGAG GCACTGACGC TTGGATCGGA CGCGCTGGAT
TCACCTGGTT TTGACCTGCT GGCGCTGTTC ACCGGATCGG AAGGTATGCT CGGCGTGACC
ACCGAAGTGA CGGTAAAACT GCTGCCGAAG CCGCCCGTGG CGCGGGTTCT GTTAGCCAGC
TTTGACTCGG TAGAAAAAGC CGGACTTGCG GTTGGTGACA TCATCGCCAA TGGCATTATC
CCCGGCGGGC TGGAGATGAT GGATAACCTG TCGATCCGCG CGGCGGAAGA TTTTATTCAT
GCCGGTTATC CCGTCGACGC CGAAGCGATT TTGTTATGCG AGCTGGACGG CGTGGAGTCT
GACGTACAGG AAGACTGCGA GCGGGTTAAC GACATCTTGT TGAAAGCGGG CGCGACTGAC
GTCCGTCTGG CACAGGACGA AGCAGAGCGC GTACGTTTCT GGGCCGGTCG CAAAAATGCG
TTCCCGGCGG TAGGACGTAT CTCCCCGGAT TACTACTGCA TGGATGGCAC CATCCCGCGT
CGCGCCCTGC CTGGCGTACT GGAAGGCATT GCCCGTTTAT CGCAGCAATA TGATTTACGT
GTTGCCAACG TCTTTCATGC CGGAGATGGC AACATGCACC CGTTAATCCT TTTCGATGCC
AACGAACCCG GTGAATTTGC CCGCGCGGAA GAGCTGGGCG GGAAGATCCT CGAACTCTGC
GTTGAAGTTG GCGGCAGCAT CAGTGGCGAA CATGGCATCG GGCGAGAAAA AATCAATCAA
ATGTGCGCCC AGTTCAACAG CGATGAAATC ACGACCTTCC ATGCGGTCAA GGCGGCGTTT
GACCCCGATG GTTTGCTGAA CCCTGGGAAA AACATTCCCA CGCTACACCG CTGTGCTGAA
TTTGGTGCCA TGCATGTGCA TCACGGTCAT TTACCTTTCC CTGAACTGGA GCGTTTCTGA
 
Protein sequence
MSILYEERLD GALLDVDRTS VLMALREHVP GLEILHTDEE IIPYECDGLS AYRTRPLLVV 
LPKQMEQVTA ILAVCHRLRV PVVTRGAGTG LSGGALPLEK GVLLVMARFK EILDINPVGR
RARVQPGVRN LAISQAVAPH NLYYAPDPSS QIACSIGGNV AENAGGVHCL KYGLTVHNLL
KIEVQTLDGE ALTLGSDALD SPGFDLLALF TGSEGMLGVT TEVTVKLLPK PPVARVLLAS
FDSVEKAGLA VGDIIANGII PGGLEMMDNL SIRAAEDFIH AGYPVDAEAI LLCELDGVES
DVQEDCERVN DILLKAGATD VRLAQDEAER VRFWAGRKNA FPAVGRISPD YYCMDGTIPR
RALPGVLEGI ARLSQQYDLR VANVFHAGDG NMHPLILFDA NEPGEFARAE ELGGKILELC
VEVGGSISGE HGIGREKINQ MCAQFNSDEI TTFHAVKAAF DPDGLLNPGK NIPTLHRCAE
FGAMHVHHGH LPFPELERF